Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh20Q8BIZ0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh20Q8BIZ0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Pcdh20Q8BIZ0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh20Q8BIZ0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.37■□□□□ 0.69
Pcdh20Q8BIZ0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh20Q8BIZ0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pcdh20Q8BIZ0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh20Q8BIZ0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh20Q8BIZ0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh20Q8BIZ0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh20Q8BIZ0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcdh20Q8BIZ0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
Pcdh20Q8BIZ0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Pcdh20Q8BIZ0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh20Q8BIZ0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh20Q8BIZ0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh20Q8BIZ0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh20Q8BIZ0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh20Q8BIZ0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.35■□□□□ 0.69
Pcdh20Q8BIZ0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh20Q8BIZ0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Pcdh20Q8BIZ0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh20Q8BIZ0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh20Q8BIZ0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.35■□□□□ 0.69
Pcdh20Q8BIZ0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh20Q8BIZ0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh20Q8BIZ0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh20Q8BIZ0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh20Q8BIZ0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdh20Q8BIZ0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh20Q8BIZ0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh20Q8BIZ0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh20Q8BIZ0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh20Q8BIZ0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh20Q8BIZ0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pcdh20Q8BIZ0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh20Q8BIZ0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh20Q8BIZ0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh20Q8BIZ0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.33■□□□□ 0.69
Pcdh20Q8BIZ0 Gm12922-201ENSMUST00000120626 809 ntBASIC19.33■□□□□ 0.68
Pcdh20Q8BIZ0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh20Q8BIZ0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh20Q8BIZ0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh20Q8BIZ0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.33■□□□□ 0.68
Pcdh20Q8BIZ0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh20Q8BIZ0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh20Q8BIZ0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh20Q8BIZ0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh20Q8BIZ0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh20Q8BIZ0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.32■□□□□ 0.68
Pcdh20Q8BIZ0 Gm9847-201ENSMUST00000052528 599 ntBASIC19.32■□□□□ 0.68
Pcdh20Q8BIZ0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdh20Q8BIZ0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Pcdh20Q8BIZ0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh20Q8BIZ0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh20Q8BIZ0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdh20Q8BIZ0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh20Q8BIZ0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh20Q8BIZ0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdh20Q8BIZ0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.31■□□□□ 0.68
Pcdh20Q8BIZ0 Gm13241-201ENSMUST00000094493 780 ntBASIC19.31■□□□□ 0.68
Pcdh20Q8BIZ0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh20Q8BIZ0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh20Q8BIZ0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh20Q8BIZ0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdh20Q8BIZ0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh20Q8BIZ0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh20Q8BIZ0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh20Q8BIZ0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh20Q8BIZ0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh20Q8BIZ0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh20Q8BIZ0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.3■□□□□ 0.68
Pcdh20Q8BIZ0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh20Q8BIZ0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh20Q8BIZ0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh20Q8BIZ0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh20Q8BIZ0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh20Q8BIZ0 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.3■□□□□ 0.68
Pcdh20Q8BIZ0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh20Q8BIZ0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh20Q8BIZ0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh20Q8BIZ0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh20Q8BIZ0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh20Q8BIZ0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh20Q8BIZ0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.29■□□□□ 0.68
Pcdh20Q8BIZ0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh20Q8BIZ0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh20Q8BIZ0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.29■□□□□ 0.68
Pcdh20Q8BIZ0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.29■□□□□ 0.68
Pcdh20Q8BIZ0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh20Q8BIZ0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh20Q8BIZ0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh20Q8BIZ0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh20Q8BIZ0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh20Q8BIZ0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh20Q8BIZ0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.28■□□□□ 0.68
Pcdh20Q8BIZ0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh20Q8BIZ0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Pcdh20Q8BIZ0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms