Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clrn3Q8BHH8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Clrn3Q8BHH8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.6■□□□□ 0.57
Clrn3Q8BHH8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clrn3Q8BHH8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Clrn3Q8BHH8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clrn3Q8BHH8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Clrn3Q8BHH8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.6■□□□□ 0.57
Clrn3Q8BHH8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Clrn3Q8BHH8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clrn3Q8BHH8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clrn3Q8BHH8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clrn3Q8BHH8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clrn3Q8BHH8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clrn3Q8BHH8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clrn3Q8BHH8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Clrn3Q8BHH8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clrn3Q8BHH8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.59■□□□□ 0.57
Clrn3Q8BHH8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clrn3Q8BHH8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.59■□□□□ 0.57
Clrn3Q8BHH8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clrn3Q8BHH8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clrn3Q8BHH8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clrn3Q8BHH8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clrn3Q8BHH8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Clrn3Q8BHH8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.58■□□□□ 0.57
Clrn3Q8BHH8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Clrn3Q8BHH8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clrn3Q8BHH8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Clrn3Q8BHH8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Clrn3Q8BHH8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Clrn3Q8BHH8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.58■□□□□ 0.56
Clrn3Q8BHH8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clrn3Q8BHH8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clrn3Q8BHH8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clrn3Q8BHH8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clrn3Q8BHH8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clrn3Q8BHH8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clrn3Q8BHH8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clrn3Q8BHH8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clrn3Q8BHH8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clrn3Q8BHH8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.57■□□□□ 0.56
Clrn3Q8BHH8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.57■□□□□ 0.56
Clrn3Q8BHH8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clrn3Q8BHH8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.57■□□□□ 0.56
Clrn3Q8BHH8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clrn3Q8BHH8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Clrn3Q8BHH8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clrn3Q8BHH8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Clrn3Q8BHH8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clrn3Q8BHH8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clrn3Q8BHH8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Clrn3Q8BHH8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clrn3Q8BHH8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clrn3Q8BHH8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clrn3Q8BHH8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clrn3Q8BHH8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clrn3Q8BHH8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clrn3Q8BHH8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clrn3Q8BHH8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clrn3Q8BHH8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clrn3Q8BHH8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
Clrn3Q8BHH8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clrn3Q8BHH8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clrn3Q8BHH8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clrn3Q8BHH8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.55■□□□□ 0.56
Clrn3Q8BHH8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.55■□□□□ 0.56
Clrn3Q8BHH8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clrn3Q8BHH8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clrn3Q8BHH8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clrn3Q8BHH8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Clrn3Q8BHH8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clrn3Q8BHH8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.54■□□□□ 0.56
Clrn3Q8BHH8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clrn3Q8BHH8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clrn3Q8BHH8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clrn3Q8BHH8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clrn3Q8BHH8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.53■□□□□ 0.56
Clrn3Q8BHH8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clrn3Q8BHH8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clrn3Q8BHH8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clrn3Q8BHH8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clrn3Q8BHH8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.53■□□□□ 0.56
Clrn3Q8BHH8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.53■□□□□ 0.56
Clrn3Q8BHH8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clrn3Q8BHH8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clrn3Q8BHH8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clrn3Q8BHH8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clrn3Q8BHH8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clrn3Q8BHH8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clrn3Q8BHH8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Clrn3Q8BHH8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Clrn3Q8BHH8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.52■□□□□ 0.56
Clrn3Q8BHH8 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.52■□□□□ 0.56
Clrn3Q8BHH8 Golgb1-201ENSMUST00000023534 498 ntBASIC18.52■□□□□ 0.56
Clrn3Q8BHH8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clrn3Q8BHH8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clrn3Q8BHH8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clrn3Q8BHH8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Clrn3Q8BHH8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms