Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lrrtm4Q80XG9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrrtm4Q80XG9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lrrtm4Q80XG9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.44■□□□□ 0.7
Lrrtm4Q80XG9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lrrtm4Q80XG9 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.43■□□□□ 0.7
Lrrtm4Q80XG9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrrtm4Q80XG9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.43■□□□□ 0.7
Lrrtm4Q80XG9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lrrtm4Q80XG9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Lrrtm4Q80XG9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrrtm4Q80XG9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.43■□□□□ 0.7
Lrrtm4Q80XG9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrrtm4Q80XG9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.43■□□□□ 0.7
Lrrtm4Q80XG9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrrtm4Q80XG9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.42■□□□□ 0.7
Lrrtm4Q80XG9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Lrrtm4Q80XG9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Lrrtm4Q80XG9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrrtm4Q80XG9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrrtm4Q80XG9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.42■□□□□ 0.7
Lrrtm4Q80XG9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.42■□□□□ 0.7
Lrrtm4Q80XG9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrrtm4Q80XG9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrrtm4Q80XG9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lrrtm4Q80XG9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrrtm4Q80XG9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrrtm4Q80XG9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrrtm4Q80XG9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrrtm4Q80XG9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrrtm4Q80XG9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.41■□□□□ 0.7
Lrrtm4Q80XG9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.41■□□□□ 0.7
Lrrtm4Q80XG9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.41■□□□□ 0.7
Lrrtm4Q80XG9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Lrrtm4Q80XG9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrrtm4Q80XG9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Lrrtm4Q80XG9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrrtm4Q80XG9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrrtm4Q80XG9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrrtm4Q80XG9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.4■□□□□ 0.7
Lrrtm4Q80XG9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Lrrtm4Q80XG9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrrtm4Q80XG9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.4■□□□□ 0.7
Lrrtm4Q80XG9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lrrtm4Q80XG9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lrrtm4Q80XG9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.39■□□□□ 0.69
Lrrtm4Q80XG9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.39■□□□□ 0.69
Lrrtm4Q80XG9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lrrtm4Q80XG9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lrrtm4Q80XG9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Lrrtm4Q80XG9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Lrrtm4Q80XG9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.39■□□□□ 0.69
Lrrtm4Q80XG9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrrtm4Q80XG9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrrtm4Q80XG9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Lrrtm4Q80XG9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrtm4Q80XG9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrtm4Q80XG9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Lrrtm4Q80XG9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.38■□□□□ 0.69
Lrrtm4Q80XG9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
Lrrtm4Q80XG9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrtm4Q80XG9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrtm4Q80XG9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrtm4Q80XG9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrtm4Q80XG9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrtm4Q80XG9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrtm4Q80XG9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrtm4Q80XG9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrtm4Q80XG9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Lrrtm4Q80XG9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrtm4Q80XG9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Lrrtm4Q80XG9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrtm4Q80XG9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
Lrrtm4Q80XG9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrtm4Q80XG9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrtm4Q80XG9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrtm4Q80XG9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrtm4Q80XG9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrtm4Q80XG9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrtm4Q80XG9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Lrrtm4Q80XG9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Lrrtm4Q80XG9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.37■□□□□ 0.69
Lrrtm4Q80XG9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrtm4Q80XG9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Lrrtm4Q80XG9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrtm4Q80XG9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.37■□□□□ 0.69
Lrrtm4Q80XG9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrtm4Q80XG9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrtm4Q80XG9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrtm4Q80XG9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrtm4Q80XG9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrtm4Q80XG9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Lrrtm4Q80XG9 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.36■□□□□ 0.69
Lrrtm4Q80XG9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrtm4Q80XG9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrtm4Q80XG9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrtm4Q80XG9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Lrrtm4Q80XG9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrtm4Q80XG9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrtm4Q80XG9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms