Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nrde2Q80XC6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nrde2Q80XC6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Nrde2Q80XC6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Nrde2Q80XC6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nrde2Q80XC6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Nrde2Q80XC6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.16■□□□□ 0.82
Nrde2Q80XC6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nrde2Q80XC6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.16■□□□□ 0.82
Nrde2Q80XC6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
Nrde2Q80XC6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nrde2Q80XC6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nrde2Q80XC6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nrde2Q80XC6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nrde2Q80XC6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nrde2Q80XC6 Smad6-203ENSMUST00000179458 273 ntBASIC20.15■□□□□ 0.82
Nrde2Q80XC6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Nrde2Q80XC6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nrde2Q80XC6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.15■□□□□ 0.82
Nrde2Q80XC6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Nrde2Q80XC6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nrde2Q80XC6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nrde2Q80XC6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nrde2Q80XC6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nrde2Q80XC6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nrde2Q80XC6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.14■□□□□ 0.81
Nrde2Q80XC6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nrde2Q80XC6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nrde2Q80XC6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nrde2Q80XC6 Gm37179-201ENSMUST00000194862 823 ntBASIC20.14■□□□□ 0.81
Nrde2Q80XC6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.14■□□□□ 0.81
Nrde2Q80XC6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.14■□□□□ 0.81
Nrde2Q80XC6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Nrde2Q80XC6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.14■□□□□ 0.81
Nrde2Q80XC6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nrde2Q80XC6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nrde2Q80XC6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Nrde2Q80XC6 Gm42778-201ENSMUST00000199644 553 ntBASIC20.13■□□□□ 0.81
Nrde2Q80XC6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nrde2Q80XC6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nrde2Q80XC6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nrde2Q80XC6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nrde2Q80XC6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Nrde2Q80XC6 Gm10849-201ENSMUST00000100397 618 ntBASIC20.12■□□□□ 0.81
Nrde2Q80XC6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.12■□□□□ 0.81
Nrde2Q80XC6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nrde2Q80XC6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nrde2Q80XC6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nrde2Q80XC6 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.12■□□□□ 0.81
Nrde2Q80XC6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.12■□□□□ 0.81
Nrde2Q80XC6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nrde2Q80XC6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nrde2Q80XC6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Nrde2Q80XC6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nrde2Q80XC6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nrde2Q80XC6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
Nrde2Q80XC6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nrde2Q80XC6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nrde2Q80XC6 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nrde2Q80XC6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nrde2Q80XC6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nrde2Q80XC6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nrde2Q80XC6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Nrde2Q80XC6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.1■□□□□ 0.81
Nrde2Q80XC6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nrde2Q80XC6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nrde2Q80XC6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nrde2Q80XC6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nrde2Q80XC6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Nrde2Q80XC6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nrde2Q80XC6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nrde2Q80XC6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nrde2Q80XC6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.09■□□□□ 0.81
Nrde2Q80XC6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nrde2Q80XC6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.09■□□□□ 0.81
Nrde2Q80XC6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nrde2Q80XC6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nrde2Q80XC6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Nrde2Q80XC6 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Nrde2Q80XC6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nrde2Q80XC6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Nrde2Q80XC6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nrde2Q80XC6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nrde2Q80XC6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Nrde2Q80XC6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Nrde2Q80XC6 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.08■□□□□ 0.8
Nrde2Q80XC6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nrde2Q80XC6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nrde2Q80XC6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nrde2Q80XC6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.07■□□□□ 0.8
Nrde2Q80XC6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nrde2Q80XC6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nrde2Q80XC6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nrde2Q80XC6 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nrde2Q80XC6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Nrde2Q80XC6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Nrde2Q80XC6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Nrde2Q80XC6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.07■□□□□ 0.8
Nrde2Q80XC6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Nrde2Q80XC6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms