Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ubr5Q80TP3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ubr5Q80TP3 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.64■□□□□ 0.41
Ubr5Q80TP3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ubr5Q80TP3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ubr5Q80TP3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ubr5Q80TP3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.63■□□□□ 0.41
Ubr5Q80TP3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.63■□□□□ 0.41
Ubr5Q80TP3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ubr5Q80TP3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubr5Q80TP3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubr5Q80TP3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.63■□□□□ 0.41
Ubr5Q80TP3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubr5Q80TP3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubr5Q80TP3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubr5Q80TP3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubr5Q80TP3 Gm13146-201ENSMUST00000118508 780 ntBASIC17.63■□□□□ 0.41
Ubr5Q80TP3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.63■□□□□ 0.41
Ubr5Q80TP3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubr5Q80TP3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubr5Q80TP3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubr5Q80TP3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ubr5Q80TP3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ubr5Q80TP3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.62■□□□□ 0.41
Ubr5Q80TP3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubr5Q80TP3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.62■□□□□ 0.41
Ubr5Q80TP3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubr5Q80TP3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubr5Q80TP3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.62■□□□□ 0.41
Ubr5Q80TP3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.62■□□□□ 0.41
Ubr5Q80TP3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ubr5Q80TP3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubr5Q80TP3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubr5Q80TP3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ubr5Q80TP3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.62■□□□□ 0.41
Ubr5Q80TP3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubr5Q80TP3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ubr5Q80TP3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Ubr5Q80TP3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.62■□□□□ 0.41
Ubr5Q80TP3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ubr5Q80TP3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.62■□□□□ 0.41
Ubr5Q80TP3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubr5Q80TP3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubr5Q80TP3 Gm6211-202ENSMUST00000167849 925 ntBASIC17.61■□□□□ 0.41
Ubr5Q80TP3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.61■□□□□ 0.41
Ubr5Q80TP3 Gm6365-201ENSMUST00000054711 744 ntBASIC17.61■□□□□ 0.41
Ubr5Q80TP3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubr5Q80TP3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubr5Q80TP3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubr5Q80TP3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.61■□□□□ 0.41
Ubr5Q80TP3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ubr5Q80TP3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Ubr5Q80TP3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubr5Q80TP3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubr5Q80TP3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubr5Q80TP3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubr5Q80TP3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.6■□□□□ 0.41
Ubr5Q80TP3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.6■□□□□ 0.41
Ubr5Q80TP3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ubr5Q80TP3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubr5Q80TP3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubr5Q80TP3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubr5Q80TP3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.6■□□□□ 0.41
Ubr5Q80TP3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubr5Q80TP3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubr5Q80TP3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubr5Q80TP3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubr5Q80TP3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ubr5Q80TP3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ubr5Q80TP3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ubr5Q80TP3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.59■□□□□ 0.41
Ubr5Q80TP3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.59■□□□□ 0.41
Ubr5Q80TP3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubr5Q80TP3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubr5Q80TP3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ubr5Q80TP3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubr5Q80TP3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ubr5Q80TP3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ubr5Q80TP3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ubr5Q80TP3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ubr5Q80TP3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ubr5Q80TP3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ubr5Q80TP3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ubr5Q80TP3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ubr5Q80TP3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
Ubr5Q80TP3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.58■□□□□ 0.41
Ubr5Q80TP3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubr5Q80TP3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.58■□□□□ 0.4
Ubr5Q80TP3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubr5Q80TP3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubr5Q80TP3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ubr5Q80TP3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubr5Q80TP3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubr5Q80TP3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ubr5Q80TP3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.57■□□□□ 0.4
Ubr5Q80TP3 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.57■□□□□ 0.4
Ubr5Q80TP3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubr5Q80TP3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr5Q80TP3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr5Q80TP3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms