Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ush1gQ80T11 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Ush1gQ80T11 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ush1gQ80T11 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ush1gQ80T11 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ush1gQ80T11 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ush1gQ80T11 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
Ush1gQ80T11 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ush1gQ80T11 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ush1gQ80T11 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ush1gQ80T11 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.83■■□□□ 1.09
Ush1gQ80T11 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ush1gQ80T11 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ush1gQ80T11 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Ush1gQ80T11 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ush1gQ80T11 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ush1gQ80T11 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ush1gQ80T11 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ush1gQ80T11 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ush1gQ80T11 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.82■■□□□ 1.08
Ush1gQ80T11 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Ush1gQ80T11 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ush1gQ80T11 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ush1gQ80T11 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ush1gQ80T11 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ush1gQ80T11 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Ush1gQ80T11 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ush1gQ80T11 Smad6-203ENSMUST00000179458 273 ntBASIC21.81■■□□□ 1.08
Ush1gQ80T11 Gm18671-201ENSMUST00000214826 683 ntBASIC21.81■■□□□ 1.08
Ush1gQ80T11 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ush1gQ80T11 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ush1gQ80T11 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ush1gQ80T11 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ush1gQ80T11 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ush1gQ80T11 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ush1gQ80T11 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ush1gQ80T11 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Ush1gQ80T11 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ush1gQ80T11 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ush1gQ80T11 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ush1gQ80T11 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Ush1gQ80T11 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Ush1gQ80T11 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ush1gQ80T11 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.79■■□□□ 1.08
Ush1gQ80T11 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ush1gQ80T11 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ush1gQ80T11 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.79■■□□□ 1.08
Ush1gQ80T11 Gm37179-201ENSMUST00000194862 823 ntBASIC21.79■■□□□ 1.08
Ush1gQ80T11 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ush1gQ80T11 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ush1gQ80T11 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.78■■□□□ 1.08
Ush1gQ80T11 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.78■■□□□ 1.08
Ush1gQ80T11 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.78■■□□□ 1.08
Ush1gQ80T11 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.78■■□□□ 1.08
Ush1gQ80T11 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ush1gQ80T11 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ush1gQ80T11 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ush1gQ80T11 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ush1gQ80T11 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ush1gQ80T11 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Ush1gQ80T11 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.77■■□□□ 1.08
Ush1gQ80T11 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.77■■□□□ 1.08
Ush1gQ80T11 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ush1gQ80T11 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ush1gQ80T11 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ush1gQ80T11 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Ush1gQ80T11 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ush1gQ80T11 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Ush1gQ80T11 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ush1gQ80T11 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.76■■□□□ 1.07
Ush1gQ80T11 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ush1gQ80T11 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Ush1gQ80T11 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ush1gQ80T11 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ush1gQ80T11 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
Ush1gQ80T11 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ush1gQ80T11 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ush1gQ80T11 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ush1gQ80T11 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.75■■□□□ 1.07
Ush1gQ80T11 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.75■■□□□ 1.07
Ush1gQ80T11 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ush1gQ80T11 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ush1gQ80T11 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ush1gQ80T11 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ush1gQ80T11 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ush1gQ80T11 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Ush1gQ80T11 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ush1gQ80T11 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.74■■□□□ 1.07
Ush1gQ80T11 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ush1gQ80T11 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ush1gQ80T11 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ush1gQ80T11 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ush1gQ80T11 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ush1gQ80T11 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.74■■□□□ 1.07
Ush1gQ80T11 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ush1gQ80T11 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ush1gQ80T11 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Ush1gQ80T11 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ush1gQ80T11 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Ush1gQ80T11 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms