Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ubfd1Q78JW9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubfd1Q78JW9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ubfd1Q78JW9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ubfd1Q78JW9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubfd1Q78JW9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubfd1Q78JW9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ubfd1Q78JW9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ubfd1Q78JW9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubfd1Q78JW9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubfd1Q78JW9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubfd1Q78JW9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubfd1Q78JW9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubfd1Q78JW9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.44■□□□□ 0.7
Ubfd1Q78JW9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ubfd1Q78JW9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.44■□□□□ 0.7
Ubfd1Q78JW9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ubfd1Q78JW9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubfd1Q78JW9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ubfd1Q78JW9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubfd1Q78JW9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubfd1Q78JW9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubfd1Q78JW9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubfd1Q78JW9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubfd1Q78JW9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubfd1Q78JW9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubfd1Q78JW9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ubfd1Q78JW9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Ubfd1Q78JW9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.43■□□□□ 0.7
Ubfd1Q78JW9 Gm11421-201ENSMUST00000122124 294 ntBASIC19.43■□□□□ 0.7
Ubfd1Q78JW9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.43■□□□□ 0.7
Ubfd1Q78JW9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.43■□□□□ 0.7
Ubfd1Q78JW9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ubfd1Q78JW9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubfd1Q78JW9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ubfd1Q78JW9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubfd1Q78JW9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ubfd1Q78JW9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubfd1Q78JW9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubfd1Q78JW9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubfd1Q78JW9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubfd1Q78JW9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubfd1Q78JW9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubfd1Q78JW9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ubfd1Q78JW9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubfd1Q78JW9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubfd1Q78JW9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubfd1Q78JW9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubfd1Q78JW9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubfd1Q78JW9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubfd1Q78JW9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubfd1Q78JW9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.41■□□□□ 0.7
Ubfd1Q78JW9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ubfd1Q78JW9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubfd1Q78JW9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ubfd1Q78JW9 Gm5874-201ENSMUST00000096101 508 ntBASIC19.41■□□□□ 0.7
Ubfd1Q78JW9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Ubfd1Q78JW9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubfd1Q78JW9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubfd1Q78JW9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ubfd1Q78JW9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ubfd1Q78JW9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ubfd1Q78JW9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.4■□□□□ 0.7
Ubfd1Q78JW9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
Ubfd1Q78JW9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ubfd1Q78JW9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ubfd1Q78JW9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
Ubfd1Q78JW9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Ubfd1Q78JW9 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.39■□□□□ 0.7
Ubfd1Q78JW9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ubfd1Q78JW9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Ubfd1Q78JW9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.39■□□□□ 0.69
Ubfd1Q78JW9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.39■□□□□ 0.69
Ubfd1Q78JW9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ubfd1Q78JW9 Gm10493-201ENSMUST00000097270 612 ntBASIC19.39■□□□□ 0.69
Ubfd1Q78JW9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ubfd1Q78JW9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ubfd1Q78JW9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Ubfd1Q78JW9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ubfd1Q78JW9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ubfd1Q78JW9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.38■□□□□ 0.69
Ubfd1Q78JW9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Ubfd1Q78JW9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.38■□□□□ 0.69
Ubfd1Q78JW9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ubfd1Q78JW9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Ubfd1Q78JW9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ubfd1Q78JW9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubfd1Q78JW9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ubfd1Q78JW9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ubfd1Q78JW9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubfd1Q78JW9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubfd1Q78JW9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
Ubfd1Q78JW9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubfd1Q78JW9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ubfd1Q78JW9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubfd1Q78JW9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Ubfd1Q78JW9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.37■□□□□ 0.69
Ubfd1Q78JW9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubfd1Q78JW9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubfd1Q78JW9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms