Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.17■□□□□ 0.02
Notch3Q61982 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Notch3Q61982 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Notch3Q61982 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Notch3Q61982 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Notch3Q61982 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Notch3Q61982 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Notch3Q61982 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Notch3Q61982 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.16■□□□□ 0.02
Notch3Q61982 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Notch3Q61982 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Notch3Q61982 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Notch3Q61982 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Notch3Q61982 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Notch3Q61982 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Notch3Q61982 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Notch3Q61982 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Notch3Q61982 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Notch3Q61982 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Notch3Q61982 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Notch3Q61982 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Notch3Q61982 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Notch3Q61982 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.15■□□□□ 0.02
Notch3Q61982 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Notch3Q61982 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Notch3Q61982 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Notch3Q61982 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
Notch3Q61982 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Notch3Q61982 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Notch3Q61982 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Notch3Q61982 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.15■□□□□ 0.02
Notch3Q61982 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Notch3Q61982 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Notch3Q61982 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.15■□□□□ 0.02
Notch3Q61982 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Notch3Q61982 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Notch3Q61982 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Notch3Q61982 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Notch3Q61982 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Notch3Q61982 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Notch3Q61982 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Notch3Q61982 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.14■□□□□ 0.01
Notch3Q61982 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Notch3Q61982 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Notch3Q61982 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Notch3Q61982 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Notch3Q61982 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Notch3Q61982 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Notch3Q61982 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Notch3Q61982 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Notch3Q61982 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Notch3Q61982 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Notch3Q61982 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Notch3Q61982 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Notch3Q61982 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.13■□□□□ 0.01
Notch3Q61982 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Notch3Q61982 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Notch3Q61982 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Notch3Q61982 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Notch3Q61982 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Notch3Q61982 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Notch3Q61982 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Notch3Q61982 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Notch3Q61982 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Notch3Q61982 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Notch3Q61982 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Notch3Q61982 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.12■□□□□ 0.01
Notch3Q61982 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Notch3Q61982 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.12■□□□□ 0.01
Notch3Q61982 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Notch3Q61982 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Notch3Q61982 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.11■□□□□ 0.01
Notch3Q61982 AV356131-201ENSMUST00000206201 750 ntBASIC15.11■□□□□ 0.01
Notch3Q61982 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Notch3Q61982 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Notch3Q61982 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Notch3Q61982 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Notch3Q61982 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Notch3Q61982 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Notch3Q61982 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Notch3Q61982 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Notch3Q61982 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Notch3Q61982 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Notch3Q61982 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Notch3Q61982 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Notch3Q61982 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Notch3Q61982 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Notch3Q61982 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Notch3Q61982 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Notch3Q61982 Gm32051-202ENSMUST00000197905 2385 ntBASIC15.1■□□□□ 0.01
Notch3Q61982 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Notch3Q61982 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Notch3Q61982 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.1■□□□□ 0.01
Notch3Q61982 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.1■□□□□ 0.01
Notch3Q61982 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Notch3Q61982 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Notch3Q61982 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Notch3Q61982 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Notch3Q61982 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.09■□□□□ 0.01
Notch3Q61982 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms