Protein–RNA interactions for Protein: Q61476

Cd55b, Complement decay-accelerating factor transmembrane isoform, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd55bQ61476 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd55bQ61476 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd55bQ61476 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd55bQ61476 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd55bQ61476 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd55bQ61476 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.47■□□□□ 0.39
Cd55bQ61476 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd55bQ61476 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd55bQ61476 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cd55bQ61476 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd55bQ61476 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd55bQ61476 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd55bQ61476 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cd55bQ61476 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cd55bQ61476 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd55bQ61476 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cd55bQ61476 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cd55bQ61476 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.45■□□□□ 0.38
Cd55bQ61476 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd55bQ61476 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Cd55bQ61476 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cd55bQ61476 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cd55bQ61476 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.44■□□□□ 0.38
Cd55bQ61476 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd55bQ61476 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd55bQ61476 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd55bQ61476 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd55bQ61476 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
Cd55bQ61476 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd55bQ61476 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd55bQ61476 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd55bQ61476 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd55bQ61476 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd55bQ61476 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.44■□□□□ 0.38
Cd55bQ61476 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd55bQ61476 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd55bQ61476 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd55bQ61476 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd55bQ61476 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd55bQ61476 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cd55bQ61476 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd55bQ61476 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd55bQ61476 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Cd55bQ61476 Gm15039-201ENSMUST00000118914 875 ntBASIC17.43■□□□□ 0.38
Cd55bQ61476 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.43■□□□□ 0.38
Cd55bQ61476 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd55bQ61476 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.43■□□□□ 0.38
Cd55bQ61476 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd55bQ61476 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.43■□□□□ 0.38
Cd55bQ61476 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cd55bQ61476 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd55bQ61476 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cd55bQ61476 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd55bQ61476 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd55bQ61476 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd55bQ61476 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.42■□□□□ 0.38
Cd55bQ61476 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cd55bQ61476 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd55bQ61476 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cd55bQ61476 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cd55bQ61476 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cd55bQ61476 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd55bQ61476 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cd55bQ61476 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd55bQ61476 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd55bQ61476 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd55bQ61476 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cd55bQ61476 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd55bQ61476 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cd55bQ61476 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.41■□□□□ 0.38
Cd55bQ61476 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd55bQ61476 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd55bQ61476 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cd55bQ61476 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd55bQ61476 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cd55bQ61476 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd55bQ61476 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cd55bQ61476 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cd55bQ61476 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cd55bQ61476 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cd55bQ61476 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
Cd55bQ61476 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.4■□□□□ 0.38
Cd55bQ61476 Mir7075-201ENSMUST00000184187 82 ntBASIC17.4■□□□□ 0.38
Cd55bQ61476 Mir6236-201ENSMUST00000184437 123 ntBASIC17.4■□□□□ 0.38
Cd55bQ61476 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.4■□□□□ 0.38
Cd55bQ61476 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cd55bQ61476 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
Cd55bQ61476 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cd55bQ61476 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd55bQ61476 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cd55bQ61476 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd55bQ61476 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cd55bQ61476 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Cd55bQ61476 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
Cd55bQ61476 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd55bQ61476 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd55bQ61476 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cd55bQ61476 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cd55bQ61476 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd55bQ61476 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms