Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcd1Q61466 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcd1Q61466 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.84■□□□□ 0.93
Smarcd1Q61466 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcd1Q61466 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcd1Q61466 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcd1Q61466 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Smarcd1Q61466 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Smarcd1Q61466 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcd1Q61466 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcd1Q61466 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcd1Q61466 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcd1Q61466 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcd1Q61466 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcd1Q61466 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcd1Q61466 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.83■□□□□ 0.93
Smarcd1Q61466 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcd1Q61466 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcd1Q61466 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smarcd1Q61466 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Smarcd1Q61466 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcd1Q61466 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcd1Q61466 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Smarcd1Q61466 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Smarcd1Q61466 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcd1Q61466 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Smarcd1Q61466 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcd1Q61466 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcd1Q61466 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Smarcd1Q61466 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcd1Q61466 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.81■□□□□ 0.92
Smarcd1Q61466 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcd1Q61466 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcd1Q61466 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Smarcd1Q61466 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Smarcd1Q61466 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcd1Q61466 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.8■□□□□ 0.92
Smarcd1Q61466 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcd1Q61466 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcd1Q61466 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcd1Q61466 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.79■□□□□ 0.92
Smarcd1Q61466 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcd1Q61466 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcd1Q61466 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Smarcd1Q61466 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcd1Q61466 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcd1Q61466 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Smarcd1Q61466 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcd1Q61466 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcd1Q61466 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.79■□□□□ 0.92
Smarcd1Q61466 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcd1Q61466 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcd1Q61466 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcd1Q61466 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcd1Q61466 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.79■□□□□ 0.92
Smarcd1Q61466 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcd1Q61466 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcd1Q61466 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcd1Q61466 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcd1Q61466 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcd1Q61466 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.78■□□□□ 0.92
Smarcd1Q61466 Gm26833-201ENSMUST00000180899 440 ntBASIC20.78■□□□□ 0.92
Smarcd1Q61466 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Smarcd1Q61466 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcd1Q61466 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Smarcd1Q61466 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.78■□□□□ 0.92
Smarcd1Q61466 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcd1Q61466 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Smarcd1Q61466 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcd1Q61466 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.77■□□□□ 0.92
Smarcd1Q61466 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.77■□□□□ 0.92
Smarcd1Q61466 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Smarcd1Q61466 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcd1Q61466 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
Smarcd1Q61466 Smad6-203ENSMUST00000179458 273 ntBASIC20.77■□□□□ 0.92
Smarcd1Q61466 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcd1Q61466 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcd1Q61466 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcd1Q61466 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.77■□□□□ 0.92
Smarcd1Q61466 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcd1Q61466 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Smarcd1Q61466 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smarcd1Q61466 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smarcd1Q61466 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.76■□□□□ 0.91
Smarcd1Q61466 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.76■□□□□ 0.91
Smarcd1Q61466 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcd1Q61466 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Smarcd1Q61466 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcd1Q61466 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcd1Q61466 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcd1Q61466 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Smarcd1Q61466 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcd1Q61466 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Smarcd1Q61466 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.75■□□□□ 0.91
Smarcd1Q61466 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.75■□□□□ 0.91
Smarcd1Q61466 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcd1Q61466 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcd1Q61466 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.75■□□□□ 0.91
Smarcd1Q61466 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcd1Q61466 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms