Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC29.41■■■□□ 2.3
Ptch1Q61115 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Ptch1Q61115 Gm13146-201ENSMUST00000118508 780 ntBASIC29.4■■■□□ 2.3
Ptch1Q61115 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Ptch1Q61115 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Ptch1Q61115 Gm5408-201ENSMUST00000197998 747 ntBASIC29.4■■■□□ 2.3
Ptch1Q61115 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Ptch1Q61115 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
Ptch1Q61115 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC29.39■■■□□ 2.3
Ptch1Q61115 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Ptch1Q61115 H3f3aos-201ENSMUST00000097448 2905 ntBASIC29.39■■■□□ 2.3
Ptch1Q61115 Gm10571-201ENSMUST00000097869 1638 ntBASIC29.39■■■□□ 2.29
Ptch1Q61115 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC29.38■■■□□ 2.29
Ptch1Q61115 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC29.38■■■□□ 2.29
Ptch1Q61115 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC29.38■■■□□ 2.29
Ptch1Q61115 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Ptch1Q61115 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Ptch1Q61115 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC29.38■■■□□ 2.29
Ptch1Q61115 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Ptch1Q61115 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
Ptch1Q61115 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Ptch1Q61115 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Ptch1Q61115 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Ptch1Q61115 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Ptch1Q61115 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC29.37■■■□□ 2.29
Ptch1Q61115 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
Ptch1Q61115 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Ptch1Q61115 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Ptch1Q61115 Gm37856-201ENSMUST00000191634 999 ntBASIC29.36■■■□□ 2.29
Ptch1Q61115 CT010467.1-202ENSMUST00000205406 714 ntBASIC29.36■■■□□ 2.29
Ptch1Q61115 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Ptch1Q61115 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
Ptch1Q61115 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ptch1Q61115 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ptch1Q61115 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ptch1Q61115 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC29.35■■■□□ 2.29
Ptch1Q61115 CT030146.1-201ENSMUST00000220919 217 ntBASIC29.35■■■□□ 2.29
Ptch1Q61115 AC135637.1-201ENSMUST00000227750 365 ntBASIC29.35■■■□□ 2.29
Ptch1Q61115 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ptch1Q61115 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ptch1Q61115 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
Ptch1Q61115 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC29.34■■■□□ 2.29
Ptch1Q61115 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Ptch1Q61115 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
Ptch1Q61115 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Ptch1Q61115 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Ptch1Q61115 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Ptch1Q61115 Gm7977-201ENSMUST00000193787 748 ntBASIC29.33■■■□□ 2.29
Ptch1Q61115 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Ptch1Q61115 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Ptch1Q61115 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Ptch1Q61115 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Ptch1Q61115 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Ptch1Q61115 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Ptch1Q61115 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Ptch1Q61115 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
Ptch1Q61115 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC29.31■■■□□ 2.28
Ptch1Q61115 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Ptch1Q61115 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ptch1Q61115 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Ptch1Q61115 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ptch1Q61115 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC29.3■■■□□ 2.28
Ptch1Q61115 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC29.3■■■□□ 2.28
Ptch1Q61115 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ptch1Q61115 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ptch1Q61115 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ptch1Q61115 Gm7290-201ENSMUST00000104990 617 ntBASIC29.29■■■□□ 2.28
Ptch1Q61115 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
Ptch1Q61115 Gm12918-201ENSMUST00000120234 636 ntBASIC29.29■■■□□ 2.28
Ptch1Q61115 Gm15710-201ENSMUST00000121821 636 ntBASIC29.29■■■□□ 2.28
Ptch1Q61115 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC29.29■■■□□ 2.28
Ptch1Q61115 Gm5075-201ENSMUST00000196916 622 ntBASIC29.29■■■□□ 2.28
Ptch1Q61115 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC29.29■■■□□ 2.28
Ptch1Q61115 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC29.29■■■□□ 2.28
Ptch1Q61115 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC29.29■■■□□ 2.28
Ptch1Q61115 Gm10812-201ENSMUST00000099864 546 ntBASIC29.29■■■□□ 2.28
Ptch1Q61115 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Ptch1Q61115 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Ptch1Q61115 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Ptch1Q61115 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Ptch1Q61115 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
Ptch1Q61115 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Ptch1Q61115 AC135963.1-201ENSMUST00000211640 717 ntBASIC29.28■■■□□ 2.28
Ptch1Q61115 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Ptch1Q61115 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Ptch1Q61115 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Ptch1Q61115 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
Ptch1Q61115 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
Ptch1Q61115 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Ptch1Q61115 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
Ptch1Q61115 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
Ptch1Q61115 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC29.27■■■□□ 2.28
Ptch1Q61115 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Ptch1Q61115 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC29.26■■■□□ 2.27
Ptch1Q61115 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Ptch1Q61115 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ptch1Q61115 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ptch1Q61115 Gm13181-201ENSMUST00000120117 1069 ntBASIC29.25■■■□□ 2.27
Ptch1Q61115 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC29.25■■■□□ 2.27
Ptch1Q61115 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms