Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sim2Q61079 Gm4968-201ENSMUST00000071458 858 ntBASIC19.54■□□□□ 0.72
Sim2Q61079 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sim2Q61079 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Sim2Q61079 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sim2Q61079 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sim2Q61079 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sim2Q61079 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sim2Q61079 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sim2Q61079 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Sim2Q61079 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sim2Q61079 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sim2Q61079 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sim2Q61079 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.53■□□□□ 0.72
Sim2Q61079 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sim2Q61079 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sim2Q61079 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Sim2Q61079 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sim2Q61079 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.53■□□□□ 0.72
Sim2Q61079 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sim2Q61079 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sim2Q61079 Gm27801-201ENSMUST00000184174 223 ntBASIC19.53■□□□□ 0.72
Sim2Q61079 Gm8520-201ENSMUST00000186517 868 ntBASIC19.53■□□□□ 0.72
Sim2Q61079 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.53■□□□□ 0.72
Sim2Q61079 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Sim2Q61079 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sim2Q61079 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sim2Q61079 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sim2Q61079 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Sim2Q61079 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Sim2Q61079 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sim2Q61079 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sim2Q61079 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sim2Q61079 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sim2Q61079 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.52■□□□□ 0.71
Sim2Q61079 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sim2Q61079 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sim2Q61079 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sim2Q61079 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sim2Q61079 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.51■□□□□ 0.71
Sim2Q61079 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sim2Q61079 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Sim2Q61079 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sim2Q61079 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sim2Q61079 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sim2Q61079 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Sim2Q61079 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sim2Q61079 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sim2Q61079 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Sim2Q61079 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sim2Q61079 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sim2Q61079 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.49■□□□□ 0.71
Sim2Q61079 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sim2Q61079 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.49■□□□□ 0.71
Sim2Q61079 Gm22325-201ENSMUST00000158904 308 ntBASIC19.49■□□□□ 0.71
Sim2Q61079 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sim2Q61079 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sim2Q61079 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sim2Q61079 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sim2Q61079 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sim2Q61079 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sim2Q61079 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Sim2Q61079 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.48■□□□□ 0.71
Sim2Q61079 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sim2Q61079 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sim2Q61079 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sim2Q61079 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sim2Q61079 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sim2Q61079 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.47■□□□□ 0.71
Sim2Q61079 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sim2Q61079 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sim2Q61079 Mir6236-201ENSMUST00000184437 123 ntBASIC19.47■□□□□ 0.71
Sim2Q61079 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sim2Q61079 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sim2Q61079 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.47■□□□□ 0.71
Sim2Q61079 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sim2Q61079 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Sim2Q61079 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sim2Q61079 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.46■□□□□ 0.71
Sim2Q61079 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.46■□□□□ 0.71
Sim2Q61079 Mir7071-201ENSMUST00000184847 69 ntBASIC19.46■□□□□ 0.71
Sim2Q61079 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Sim2Q61079 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Sim2Q61079 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sim2Q61079 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sim2Q61079 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sim2Q61079 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sim2Q61079 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sim2Q61079 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Sim2Q61079 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sim2Q61079 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Sim2Q61079 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sim2Q61079 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sim2Q61079 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sim2Q61079 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sim2Q61079 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sim2Q61079 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.45■□□□□ 0.7
Sim2Q61079 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sim2Q61079 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sim2Q61079 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms