Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.95■□□□□ 0.62
Nr1h4Q60641 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.95■□□□□ 0.62
Nr1h4Q60641 Gm10399-202ENSMUST00000202768 748 ntBASIC18.95■□□□□ 0.62
Nr1h4Q60641 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.95■□□□□ 0.62
Nr1h4Q60641 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr1h4Q60641 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr1h4Q60641 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nr1h4Q60641 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr1h4Q60641 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.95■□□□□ 0.62
Nr1h4Q60641 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Nr1h4Q60641 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h4Q60641 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h4Q60641 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h4Q60641 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h4Q60641 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.94■□□□□ 0.62
Nr1h4Q60641 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Nr1h4Q60641 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h4Q60641 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h4Q60641 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.94■□□□□ 0.62
Nr1h4Q60641 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.94■□□□□ 0.62
Nr1h4Q60641 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h4Q60641 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h4Q60641 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h4Q60641 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h4Q60641 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h4Q60641 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.94■□□□□ 0.62
Nr1h4Q60641 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h4Q60641 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1h4Q60641 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1h4Q60641 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1h4Q60641 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1h4Q60641 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1h4Q60641 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1h4Q60641 Golph3-202ENSMUST00000226517 2359 ntBASIC18.93■□□□□ 0.62
Nr1h4Q60641 Iqck-206ENSMUST00000208658 2891 ntBASIC18.93■□□□□ 0.62
Nr1h4Q60641 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1h4Q60641 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Nr1h4Q60641 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Nr1h4Q60641 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Nr1h4Q60641 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Nr1h4Q60641 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Nr1h4Q60641 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nr1h4Q60641 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nr1h4Q60641 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.92■□□□□ 0.62
Nr1h4Q60641 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.92■□□□□ 0.62
Nr1h4Q60641 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nr1h4Q60641 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Nr1h4Q60641 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nr1h4Q60641 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nr1h4Q60641 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Nr1h4Q60641 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nr1h4Q60641 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nr1h4Q60641 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.91■□□□□ 0.62
Nr1h4Q60641 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.91■□□□□ 0.62
Nr1h4Q60641 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.91■□□□□ 0.62
Nr1h4Q60641 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nr1h4Q60641 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Nr1h4Q60641 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nr1h4Q60641 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Nr1h4Q60641 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Nr1h4Q60641 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nr1h4Q60641 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nr1h4Q60641 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nr1h4Q60641 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Nr1h4Q60641 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nr1h4Q60641 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Nr1h4Q60641 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.9■□□□□ 0.62
Nr1h4Q60641 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.9■□□□□ 0.62
Nr1h4Q60641 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.9■□□□□ 0.62
Nr1h4Q60641 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Nr1h4Q60641 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.9■□□□□ 0.62
Nr1h4Q60641 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nr1h4Q60641 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nr1h4Q60641 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nr1h4Q60641 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nr1h4Q60641 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nr1h4Q60641 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nr1h4Q60641 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nr1h4Q60641 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.89■□□□□ 0.61
Nr1h4Q60641 Gm43566-201ENSMUST00000196851 808 ntBASIC18.89■□□□□ 0.61
Nr1h4Q60641 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nr1h4Q60641 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nr1h4Q60641 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nr1h4Q60641 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Nr1h4Q60641 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.89■□□□□ 0.61
Nr1h4Q60641 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nr1h4Q60641 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nr1h4Q60641 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nr1h4Q60641 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Nr1h4Q60641 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nr1h4Q60641 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Nr1h4Q60641 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nr1h4Q60641 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nr1h4Q60641 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nr1h4Q60641 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nr1h4Q60641 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nr1h4Q60641 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Nr1h4Q60641 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.87■□□□□ 0.61
Nr1h4Q60641 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nr1h4Q60641 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms