Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Atp13a4Q5XF90 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Atp13a4Q5XF90 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Atp13a4Q5XF90 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Atp13a4Q5XF90 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Atp13a4Q5XF90 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Atp13a4Q5XF90 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Atp13a4Q5XF90 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Atp13a4Q5XF90 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.58■■□□□ 1.05
Atp13a4Q5XF90 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Atp13a4Q5XF90 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Atp13a4Q5XF90 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.58■■□□□ 1.04
Atp13a4Q5XF90 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Atp13a4Q5XF90 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.58■■□□□ 1.04
Atp13a4Q5XF90 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Atp13a4Q5XF90 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Atp13a4Q5XF90 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.57■■□□□ 1.04
Atp13a4Q5XF90 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Atp13a4Q5XF90 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Atp13a4Q5XF90 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Atp13a4Q5XF90 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.57■■□□□ 1.04
Atp13a4Q5XF90 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Atp13a4Q5XF90 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Atp13a4Q5XF90 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.57■■□□□ 1.04
Atp13a4Q5XF90 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Atp13a4Q5XF90 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Atp13a4Q5XF90 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Atp13a4Q5XF90 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Atp13a4Q5XF90 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.56■■□□□ 1.04
Atp13a4Q5XF90 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Atp13a4Q5XF90 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Atp13a4Q5XF90 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Atp13a4Q5XF90 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.56■■□□□ 1.04
Atp13a4Q5XF90 Gm13241-201ENSMUST00000094493 780 ntBASIC21.56■■□□□ 1.04
Atp13a4Q5XF90 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Atp13a4Q5XF90 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Atp13a4Q5XF90 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Atp13a4Q5XF90 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
Atp13a4Q5XF90 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.55■■□□□ 1.04
Atp13a4Q5XF90 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.55■■□□□ 1.04
Atp13a4Q5XF90 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.55■■□□□ 1.04
Atp13a4Q5XF90 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Atp13a4Q5XF90 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.55■■□□□ 1.04
Atp13a4Q5XF90 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Atp13a4Q5XF90 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Atp13a4Q5XF90 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Atp13a4Q5XF90 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Atp13a4Q5XF90 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Atp13a4Q5XF90 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Atp13a4Q5XF90 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Atp13a4Q5XF90 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Atp13a4Q5XF90 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Atp13a4Q5XF90 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Atp13a4Q5XF90 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Atp13a4Q5XF90 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Atp13a4Q5XF90 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Atp13a4Q5XF90 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Atp13a4Q5XF90 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Atp13a4Q5XF90 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.53■■□□□ 1.04
Atp13a4Q5XF90 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.53■■□□□ 1.04
Atp13a4Q5XF90 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Atp13a4Q5XF90 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.53■■□□□ 1.04
Atp13a4Q5XF90 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
Atp13a4Q5XF90 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Atp13a4Q5XF90 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Atp13a4Q5XF90 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Atp13a4Q5XF90 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Atp13a4Q5XF90 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Atp13a4Q5XF90 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Atp13a4Q5XF90 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Atp13a4Q5XF90 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Atp13a4Q5XF90 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.04
Atp13a4Q5XF90 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Atp13a4Q5XF90 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Atp13a4Q5XF90 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Atp13a4Q5XF90 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Atp13a4Q5XF90 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Atp13a4Q5XF90 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.51■■□□□ 1.03
Atp13a4Q5XF90 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Atp13a4Q5XF90 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Atp13a4Q5XF90 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Atp13a4Q5XF90 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Atp13a4Q5XF90 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Atp13a4Q5XF90 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Atp13a4Q5XF90 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Atp13a4Q5XF90 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Atp13a4Q5XF90 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Atp13a4Q5XF90 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Atp13a4Q5XF90 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.51■■□□□ 1.03
Atp13a4Q5XF90 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Atp13a4Q5XF90 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Atp13a4Q5XF90 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.5■■□□□ 1.03
Atp13a4Q5XF90 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.5■■□□□ 1.03
Atp13a4Q5XF90 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Atp13a4Q5XF90 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Atp13a4Q5XF90 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
Atp13a4Q5XF90 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Atp13a4Q5XF90 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Atp13a4Q5XF90 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Atp13a4Q5XF90 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms