Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC24.78■■□□□ 1.56
Ubr3Q5U430 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ubr3Q5U430 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ubr3Q5U430 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ubr3Q5U430 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
Ubr3Q5U430 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC24.77■■□□□ 1.56
Ubr3Q5U430 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ubr3Q5U430 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Ubr3Q5U430 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Ubr3Q5U430 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ubr3Q5U430 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC24.77■■□□□ 1.56
Ubr3Q5U430 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ubr3Q5U430 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ubr3Q5U430 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ubr3Q5U430 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
Ubr3Q5U430 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC24.76■■□□□ 1.55
Ubr3Q5U430 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ubr3Q5U430 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ubr3Q5U430 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ubr3Q5U430 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ubr3Q5U430 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC24.75■■□□□ 1.55
Ubr3Q5U430 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Ubr3Q5U430 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
Ubr3Q5U430 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ubr3Q5U430 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ubr3Q5U430 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC24.75■■□□□ 1.55
Ubr3Q5U430 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ubr3Q5U430 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC24.75■■□□□ 1.55
Ubr3Q5U430 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Ubr3Q5U430 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Ubr3Q5U430 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC24.75■■□□□ 1.55
Ubr3Q5U430 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ubr3Q5U430 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ubr3Q5U430 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Ubr3Q5U430 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Ubr3Q5U430 Gm22240-201ENSMUST00000175225 82 ntBASIC24.74■■□□□ 1.55
Ubr3Q5U430 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Ubr3Q5U430 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ubr3Q5U430 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ubr3Q5U430 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
Ubr3Q5U430 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC24.73■■□□□ 1.55
Ubr3Q5U430 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ubr3Q5U430 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Ubr3Q5U430 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC24.73■■□□□ 1.55
Ubr3Q5U430 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ubr3Q5U430 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ubr3Q5U430 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC24.72■■□□□ 1.55
Ubr3Q5U430 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ubr3Q5U430 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Ubr3Q5U430 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ubr3Q5U430 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC24.72■■□□□ 1.55
Ubr3Q5U430 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ubr3Q5U430 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Ubr3Q5U430 Gm6211-202ENSMUST00000167849 925 ntBASIC24.72■■□□□ 1.55
Ubr3Q5U430 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ubr3Q5U430 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Ubr3Q5U430 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Ubr3Q5U430 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ubr3Q5U430 Mir7071-201ENSMUST00000184847 69 ntBASIC24.71■■□□□ 1.55
Ubr3Q5U430 Gm26524-201ENSMUST00000192339 390 ntBASIC24.71■■□□□ 1.55
Ubr3Q5U430 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ubr3Q5U430 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Ubr3Q5U430 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.71■■□□□ 1.55
Ubr3Q5U430 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Ubr3Q5U430 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.55
Ubr3Q5U430 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Ubr3Q5U430 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC24.69■■□□□ 1.54
Ubr3Q5U430 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Ubr3Q5U430 Gm13168-201ENSMUST00000121771 632 ntBASIC24.68■■□□□ 1.54
Ubr3Q5U430 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC24.68■■□□□ 1.54
Ubr3Q5U430 Gm5408-201ENSMUST00000197998 747 ntBASIC24.68■■□□□ 1.54
Ubr3Q5U430 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC24.68■■□□□ 1.54
Ubr3Q5U430 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ubr3Q5U430 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC24.68■■□□□ 1.54
Ubr3Q5U430 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ubr3Q5U430 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC24.68■■□□□ 1.54
Ubr3Q5U430 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC24.68■■□□□ 1.54
Ubr3Q5U430 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC24.68■■□□□ 1.54
Ubr3Q5U430 AC122769.4-201ENSMUST00000228166 901 ntBASIC24.68■■□□□ 1.54
Ubr3Q5U430 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC24.67■■□□□ 1.54
Ubr3Q5U430 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC24.67■■□□□ 1.54
Ubr3Q5U430 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ubr3Q5U430 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Ubr3Q5U430 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ubr3Q5U430 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ubr3Q5U430 Gm37415-201ENSMUST00000192265 2054 ntBASIC24.66■■□□□ 1.54
Ubr3Q5U430 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Ubr3Q5U430 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ubr3Q5U430 Gm7290-201ENSMUST00000104990 617 ntBASIC24.66■■□□□ 1.54
Ubr3Q5U430 Gm12918-201ENSMUST00000120234 636 ntBASIC24.66■■□□□ 1.54
Ubr3Q5U430 Gm15710-201ENSMUST00000121821 636 ntBASIC24.66■■□□□ 1.54
Ubr3Q5U430 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC24.66■■□□□ 1.54
Ubr3Q5U430 Gm8520-201ENSMUST00000186517 868 ntBASIC24.66■■□□□ 1.54
Ubr3Q5U430 Gm5075-201ENSMUST00000196916 622 ntBASIC24.66■■□□□ 1.54
Ubr3Q5U430 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC24.66■■□□□ 1.54
Ubr3Q5U430 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC24.66■■□□□ 1.54
Ubr3Q5U430 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ubr3Q5U430 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ubr3Q5U430 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ubr3Q5U430 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms