Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Trav7d-4Q5R1H9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7d-4Q5R1H9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7d-4Q5R1H9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7d-4Q5R1H9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav7d-4Q5R1H9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7d-4Q5R1H9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7d-4Q5R1H9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav7d-4Q5R1H9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7d-4Q5R1H9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7d-4Q5R1H9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7d-4Q5R1H9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7d-4Q5R1H9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7d-4Q5R1H9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7d-4Q5R1H9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7d-4Q5R1H9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7d-4Q5R1H9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7d-4Q5R1H9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Trav7d-4Q5R1H9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav7d-4Q5R1H9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.16■□□□□ 0.02
Trav7d-4Q5R1H9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7d-4Q5R1H9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7d-4Q5R1H9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7d-4Q5R1H9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7d-4Q5R1H9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7d-4Q5R1H9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7d-4Q5R1H9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trav7d-4Q5R1H9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav7d-4Q5R1H9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7d-4Q5R1H9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav7d-4Q5R1H9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav7d-4Q5R1H9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7d-4Q5R1H9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav7d-4Q5R1H9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7d-4Q5R1H9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7d-4Q5R1H9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7d-4Q5R1H9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7d-4Q5R1H9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7d-4Q5R1H9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Trav7d-4Q5R1H9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7d-4Q5R1H9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7d-4Q5R1H9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav7d-4Q5R1H9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7d-4Q5R1H9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7d-4Q5R1H9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7d-4Q5R1H9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7d-4Q5R1H9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav7d-4Q5R1H9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7d-4Q5R1H9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7d-4Q5R1H9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7d-4Q5R1H9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7d-4Q5R1H9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7d-4Q5R1H9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7d-4Q5R1H9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trav7d-4Q5R1H9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC15.13■□□□□ 0.01
Trav7d-4Q5R1H9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7d-4Q5R1H9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav7d-4Q5R1H9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Trav7d-4Q5R1H9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav7d-4Q5R1H9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7d-4Q5R1H9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7d-4Q5R1H9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7d-4Q5R1H9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7d-4Q5R1H9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7d-4Q5R1H9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7d-4Q5R1H9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav7d-4Q5R1H9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7d-4Q5R1H9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7d-4Q5R1H9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav7d-4Q5R1H9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7d-4Q5R1H9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7d-4Q5R1H9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7d-4Q5R1H9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7d-4Q5R1H9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7d-4Q5R1H9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7d-4Q5R1H9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trav7d-4Q5R1H9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7d-4Q5R1H9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7d-4Q5R1H9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav7d-4Q5R1H9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7d-4Q5R1H9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7d-4Q5R1H9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7d-4Q5R1H9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7d-4Q5R1H9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav7d-4Q5R1H9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7d-4Q5R1H9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Trav7d-4Q5R1H9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7d-4Q5R1H9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav7d-4Q5R1H9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7d-4Q5R1H9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC15.1■□□□□ 0.01
Trav7d-4Q5R1H9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7d-4Q5R1H9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7d-4Q5R1H9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7d-4Q5R1H9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7d-4Q5R1H9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
Trav7d-4Q5R1H9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7d-4Q5R1H9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7d-4Q5R1H9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav7d-4Q5R1H9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7d-4Q5R1H9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms