Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.6■□□□□ 0.73
Trav8d-2Q5R1B6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trav8d-2Q5R1B6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
Trav8d-2Q5R1B6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav8d-2Q5R1B6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav8d-2Q5R1B6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.59■□□□□ 0.73
Trav8d-2Q5R1B6 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.59■□□□□ 0.73
Trav8d-2Q5R1B6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav8d-2Q5R1B6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trav8d-2Q5R1B6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav8d-2Q5R1B6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav8d-2Q5R1B6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav8d-2Q5R1B6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trav8d-2Q5R1B6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Trav8d-2Q5R1B6 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trav8d-2Q5R1B6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Trav8d-2Q5R1B6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trav8d-2Q5R1B6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trav8d-2Q5R1B6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav8d-2Q5R1B6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.58■□□□□ 0.72
Trav8d-2Q5R1B6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.58■□□□□ 0.72
Trav8d-2Q5R1B6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav8d-2Q5R1B6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav8d-2Q5R1B6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav8d-2Q5R1B6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Trav8d-2Q5R1B6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav8d-2Q5R1B6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav8d-2Q5R1B6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav8d-2Q5R1B6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Trav8d-2Q5R1B6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trav8d-2Q5R1B6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trav8d-2Q5R1B6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav8d-2Q5R1B6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav8d-2Q5R1B6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.57■□□□□ 0.72
Trav8d-2Q5R1B6 Gm8520-201ENSMUST00000186517 868 ntBASIC19.57■□□□□ 0.72
Trav8d-2Q5R1B6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.57■□□□□ 0.72
Trav8d-2Q5R1B6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.57■□□□□ 0.72
Trav8d-2Q5R1B6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav8d-2Q5R1B6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav8d-2Q5R1B6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav8d-2Q5R1B6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.56■□□□□ 0.72
Trav8d-2Q5R1B6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav8d-2Q5R1B6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav8d-2Q5R1B6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav8d-2Q5R1B6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav8d-2Q5R1B6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav8d-2Q5R1B6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.56■□□□□ 0.72
Trav8d-2Q5R1B6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Trav8d-2Q5R1B6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav8d-2Q5R1B6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav8d-2Q5R1B6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav8d-2Q5R1B6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav8d-2Q5R1B6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav8d-2Q5R1B6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav8d-2Q5R1B6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav8d-2Q5R1B6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav8d-2Q5R1B6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav8d-2Q5R1B6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav8d-2Q5R1B6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav8d-2Q5R1B6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav8d-2Q5R1B6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav8d-2Q5R1B6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trav8d-2Q5R1B6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.55■□□□□ 0.72
Trav8d-2Q5R1B6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav8d-2Q5R1B6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav8d-2Q5R1B6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav8d-2Q5R1B6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav8d-2Q5R1B6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav8d-2Q5R1B6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav8d-2Q5R1B6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav8d-2Q5R1B6 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.54■□□□□ 0.72
Trav8d-2Q5R1B6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.54■□□□□ 0.72
Trav8d-2Q5R1B6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trav8d-2Q5R1B6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav8d-2Q5R1B6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav8d-2Q5R1B6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trav8d-2Q5R1B6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Trav8d-2Q5R1B6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.53■□□□□ 0.72
Trav8d-2Q5R1B6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav8d-2Q5R1B6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav8d-2Q5R1B6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav8d-2Q5R1B6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav8d-2Q5R1B6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trav8d-2Q5R1B6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trav8d-2Q5R1B6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trav8d-2Q5R1B6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav8d-2Q5R1B6 Gm7290-201ENSMUST00000104990 617 ntBASIC19.51■□□□□ 0.71
Trav8d-2Q5R1B6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.51■□□□□ 0.71
Trav8d-2Q5R1B6 Gm12918-201ENSMUST00000120234 636 ntBASIC19.51■□□□□ 0.71
Trav8d-2Q5R1B6 Gm15710-201ENSMUST00000121821 636 ntBASIC19.51■□□□□ 0.71
Trav8d-2Q5R1B6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.51■□□□□ 0.71
Trav8d-2Q5R1B6 Gm5075-201ENSMUST00000196916 622 ntBASIC19.51■□□□□ 0.71
Trav8d-2Q5R1B6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.51■□□□□ 0.71
Trav8d-2Q5R1B6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.51■□□□□ 0.71
Trav8d-2Q5R1B6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav8d-2Q5R1B6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Trav8d-2Q5R1B6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav8d-2Q5R1B6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav8d-2Q5R1B6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav8d-2Q5R1B6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms