Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clhc1Q5M6W3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clhc1Q5M6W3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clhc1Q5M6W3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.13■□□□□ 0.65
Clhc1Q5M6W3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clhc1Q5M6W3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clhc1Q5M6W3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Clhc1Q5M6W3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.13■□□□□ 0.65
Clhc1Q5M6W3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Clhc1Q5M6W3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clhc1Q5M6W3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clhc1Q5M6W3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.13■□□□□ 0.65
Clhc1Q5M6W3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Clhc1Q5M6W3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clhc1Q5M6W3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clhc1Q5M6W3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clhc1Q5M6W3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clhc1Q5M6W3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clhc1Q5M6W3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.12■□□□□ 0.65
Clhc1Q5M6W3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Clhc1Q5M6W3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Clhc1Q5M6W3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clhc1Q5M6W3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clhc1Q5M6W3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Clhc1Q5M6W3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clhc1Q5M6W3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clhc1Q5M6W3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clhc1Q5M6W3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clhc1Q5M6W3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clhc1Q5M6W3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.11■□□□□ 0.65
Clhc1Q5M6W3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clhc1Q5M6W3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Clhc1Q5M6W3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clhc1Q5M6W3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clhc1Q5M6W3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.11■□□□□ 0.65
Clhc1Q5M6W3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Clhc1Q5M6W3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Clhc1Q5M6W3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Clhc1Q5M6W3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clhc1Q5M6W3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.1■□□□□ 0.65
Clhc1Q5M6W3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.1■□□□□ 0.65
Clhc1Q5M6W3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.1■□□□□ 0.65
Clhc1Q5M6W3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clhc1Q5M6W3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Clhc1Q5M6W3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clhc1Q5M6W3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clhc1Q5M6W3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Clhc1Q5M6W3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clhc1Q5M6W3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clhc1Q5M6W3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clhc1Q5M6W3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clhc1Q5M6W3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.08■□□□□ 0.64
Clhc1Q5M6W3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Clhc1Q5M6W3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Clhc1Q5M6W3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clhc1Q5M6W3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clhc1Q5M6W3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clhc1Q5M6W3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clhc1Q5M6W3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Clhc1Q5M6W3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Golph3-205ENSMUST00000228671 2842 ntBASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clhc1Q5M6W3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Clhc1Q5M6W3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clhc1Q5M6W3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clhc1Q5M6W3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clhc1Q5M6W3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Clhc1Q5M6W3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Clhc1Q5M6W3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Clhc1Q5M6W3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clhc1Q5M6W3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Clhc1Q5M6W3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clhc1Q5M6W3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Clhc1Q5M6W3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clhc1Q5M6W3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Clhc1Q5M6W3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms