Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clhc1Q5M6W3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clhc1Q5M6W3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clhc1Q5M6W3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.13■□□□□ 0.65
Clhc1Q5M6W3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clhc1Q5M6W3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clhc1Q5M6W3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Clhc1Q5M6W3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.13■□□□□ 0.65
Clhc1Q5M6W3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Clhc1Q5M6W3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clhc1Q5M6W3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clhc1Q5M6W3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.13■□□□□ 0.65
Clhc1Q5M6W3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Clhc1Q5M6W3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clhc1Q5M6W3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clhc1Q5M6W3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clhc1Q5M6W3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clhc1Q5M6W3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clhc1Q5M6W3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.12■□□□□ 0.65
Clhc1Q5M6W3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Clhc1Q5M6W3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Clhc1Q5M6W3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clhc1Q5M6W3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clhc1Q5M6W3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Clhc1Q5M6W3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clhc1Q5M6W3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clhc1Q5M6W3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clhc1Q5M6W3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clhc1Q5M6W3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clhc1Q5M6W3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.11■□□□□ 0.65
Clhc1Q5M6W3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clhc1Q5M6W3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Clhc1Q5M6W3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clhc1Q5M6W3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clhc1Q5M6W3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.11■□□□□ 0.65
Clhc1Q5M6W3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Clhc1Q5M6W3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Clhc1Q5M6W3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Clhc1Q5M6W3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clhc1Q5M6W3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.1■□□□□ 0.65
Clhc1Q5M6W3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.1■□□□□ 0.65
Clhc1Q5M6W3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.1■□□□□ 0.65
Clhc1Q5M6W3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clhc1Q5M6W3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Clhc1Q5M6W3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clhc1Q5M6W3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clhc1Q5M6W3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clhc1Q5M6W3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Clhc1Q5M6W3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clhc1Q5M6W3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clhc1Q5M6W3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clhc1Q5M6W3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clhc1Q5M6W3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.08■□□□□ 0.64
Clhc1Q5M6W3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Clhc1Q5M6W3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Clhc1Q5M6W3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clhc1Q5M6W3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clhc1Q5M6W3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clhc1Q5M6W3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clhc1Q5M6W3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Clhc1Q5M6W3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Golph3-205ENSMUST00000228671 2842 ntBASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clhc1Q5M6W3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clhc1Q5M6W3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Clhc1Q5M6W3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clhc1Q5M6W3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clhc1Q5M6W3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clhc1Q5M6W3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Clhc1Q5M6W3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Clhc1Q5M6W3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Clhc1Q5M6W3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clhc1Q5M6W3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Clhc1Q5M6W3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clhc1Q5M6W3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Clhc1Q5M6W3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clhc1Q5M6W3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Clhc1Q5M6W3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms