Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps41Q5KU39 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Vps41Q5KU39 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps41Q5KU39 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Vps41Q5KU39 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vps41Q5KU39 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps41Q5KU39 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps41Q5KU39 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps41Q5KU39 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vps41Q5KU39 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps41Q5KU39 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps41Q5KU39 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps41Q5KU39 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps41Q5KU39 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps41Q5KU39 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps41Q5KU39 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vps41Q5KU39 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vps41Q5KU39 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vps41Q5KU39 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.72■□□□□ 0.91
Vps41Q5KU39 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.72■□□□□ 0.91
Vps41Q5KU39 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vps41Q5KU39 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vps41Q5KU39 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps41Q5KU39 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps41Q5KU39 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps41Q5KU39 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Vps41Q5KU39 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps41Q5KU39 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps41Q5KU39 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vps41Q5KU39 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Vps41Q5KU39 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps41Q5KU39 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps41Q5KU39 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vps41Q5KU39 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Vps41Q5KU39 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps41Q5KU39 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Vps41Q5KU39 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps41Q5KU39 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps41Q5KU39 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Vps41Q5KU39 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps41Q5KU39 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps41Q5KU39 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.71■□□□□ 0.91
Vps41Q5KU39 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps41Q5KU39 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps41Q5KU39 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps41Q5KU39 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps41Q5KU39 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Vps41Q5KU39 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps41Q5KU39 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vps41Q5KU39 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps41Q5KU39 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Vps41Q5KU39 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Vps41Q5KU39 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.69■□□□□ 0.9
Vps41Q5KU39 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
Vps41Q5KU39 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps41Q5KU39 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps41Q5KU39 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps41Q5KU39 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Vps41Q5KU39 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps41Q5KU39 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps41Q5KU39 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.68■□□□□ 0.9
Vps41Q5KU39 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.68■□□□□ 0.9
Vps41Q5KU39 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps41Q5KU39 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vps41Q5KU39 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps41Q5KU39 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.67■□□□□ 0.9
Vps41Q5KU39 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.67■□□□□ 0.9
Vps41Q5KU39 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps41Q5KU39 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps41Q5KU39 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.67■□□□□ 0.9
Vps41Q5KU39 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps41Q5KU39 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps41Q5KU39 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Vps41Q5KU39 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Vps41Q5KU39 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vps41Q5KU39 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps41Q5KU39 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Vps41Q5KU39 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.66■□□□□ 0.9
Vps41Q5KU39 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Vps41Q5KU39 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Vps41Q5KU39 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps41Q5KU39 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Vps41Q5KU39 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Vps41Q5KU39 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps41Q5KU39 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps41Q5KU39 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps41Q5KU39 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vps41Q5KU39 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.66■□□□□ 0.9
Vps41Q5KU39 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps41Q5KU39 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps41Q5KU39 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps41Q5KU39 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps41Q5KU39 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps41Q5KU39 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps41Q5KU39 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.65■□□□□ 0.9
Vps41Q5KU39 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.65■□□□□ 0.9
Vps41Q5KU39 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Vps41Q5KU39 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.65■□□□□ 0.9
Vps41Q5KU39 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vps41Q5KU39 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms