Protein–RNA interactions for Protein: Q3V038

Ttc9, Tetratricopeptide repeat protein 9A, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc9Q3V038 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ttc9Q3V038 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ttc9Q3V038 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Ttc9Q3V038 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ttc9Q3V038 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ttc9Q3V038 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ttc9Q3V038 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ttc9Q3V038 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ttc9Q3V038 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ttc9Q3V038 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ttc9Q3V038 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Ttc9Q3V038 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.32■■□□□ 1
Ttc9Q3V038 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.32■■□□□ 1
Ttc9Q3V038 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ttc9Q3V038 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ttc9Q3V038 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ttc9Q3V038 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ttc9Q3V038 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ttc9Q3V038 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ttc9Q3V038 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ttc9Q3V038 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ttc9Q3V038 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ttc9Q3V038 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ttc9Q3V038 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ttc9Q3V038 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ttc9Q3V038 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ttc9Q3V038 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ttc9Q3V038 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.3■■□□□ 1
Ttc9Q3V038 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ttc9Q3V038 Gm43530-201ENSMUST00000195920 274 ntBASIC21.3■■□□□ 1
Ttc9Q3V038 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ttc9Q3V038 Gm42642-201ENSMUST00000200683 355 ntBASIC21.3■■□□□ 1
Ttc9Q3V038 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ttc9Q3V038 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ttc9Q3V038 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ttc9Q3V038 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ttc9Q3V038 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ttc9Q3V038 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Ttc9Q3V038 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Ttc9Q3V038 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.29■■□□□ 1
Ttc9Q3V038 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ttc9Q3V038 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ttc9Q3V038 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ttc9Q3V038 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ttc9Q3V038 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ttc9Q3V038 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ttc9Q3V038 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ttc9Q3V038 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.29■■□□□ 1
Ttc9Q3V038 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ttc9Q3V038 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ttc9Q3V038 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Ttc9Q3V038 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ttc9Q3V038 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Ttc9Q3V038 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.28■■□□□ 1
Ttc9Q3V038 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ttc9Q3V038 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ttc9Q3V038 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.28■■□□□ 1
Ttc9Q3V038 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ttc9Q3V038 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Ttc9Q3V038 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ttc9Q3V038 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ttc9Q3V038 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
Ttc9Q3V038 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Ttc9Q3V038 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ttc9Q3V038 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ttc9Q3V038 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.27■■□□□ 1
Ttc9Q3V038 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ttc9Q3V038 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ttc9Q3V038 Spcs1-204ENSMUST00000226782 949 ntBASIC21.27■■□□□ 1
Ttc9Q3V038 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.27■■□□□ 1
Ttc9Q3V038 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ttc9Q3V038 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ttc9Q3V038 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ttc9Q3V038 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ttc9Q3V038 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ttc9Q3V038 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ttc9Q3V038 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ttc9Q3V038 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ttc9Q3V038 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.26■□□□□ 0.99
Ttc9Q3V038 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ttc9Q3V038 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ttc9Q3V038 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ttc9Q3V038 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.26■□□□□ 0.99
Ttc9Q3V038 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.26■□□□□ 0.99
Ttc9Q3V038 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ttc9Q3V038 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Ttc9Q3V038 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ttc9Q3V038 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Ttc9Q3V038 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ttc9Q3V038 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ttc9Q3V038 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ttc9Q3V038 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.25■□□□□ 0.99
Ttc9Q3V038 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.25■□□□□ 0.99
Ttc9Q3V038 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.25■□□□□ 0.99
Ttc9Q3V038 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.25■□□□□ 0.99
Ttc9Q3V038 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ttc9Q3V038 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ttc9Q3V038 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ttc9Q3V038 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ttc9Q3V038 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms