Protein–RNA interactions for Protein: Q3V009

Tmed1, Transmembrane emp24 domain-containing protein 1, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmed1Q3V009 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tmed1Q3V009 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tmed1Q3V009 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tmed1Q3V009 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tmed1Q3V009 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tmed1Q3V009 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.43■□□□□ 0.7
Tmed1Q3V009 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Tmed1Q3V009 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.43■□□□□ 0.7
Tmed1Q3V009 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tmed1Q3V009 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Tmed1Q3V009 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Tmed1Q3V009 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tmed1Q3V009 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmed1Q3V009 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmed1Q3V009 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmed1Q3V009 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tmed1Q3V009 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Tmed1Q3V009 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmed1Q3V009 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmed1Q3V009 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tmed1Q3V009 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.42■□□□□ 0.7
Tmed1Q3V009 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Tmed1Q3V009 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmed1Q3V009 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmed1Q3V009 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.42■□□□□ 0.7
Tmed1Q3V009 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tmed1Q3V009 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmed1Q3V009 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmed1Q3V009 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmed1Q3V009 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmed1Q3V009 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.41■□□□□ 0.7
Tmed1Q3V009 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tmed1Q3V009 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tmed1Q3V009 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tmed1Q3V009 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tmed1Q3V009 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tmed1Q3V009 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tmed1Q3V009 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.41■□□□□ 0.7
Tmed1Q3V009 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.41■□□□□ 0.7
Tmed1Q3V009 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.41■□□□□ 0.7
Tmed1Q3V009 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tmed1Q3V009 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Tmed1Q3V009 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tmed1Q3V009 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.41■□□□□ 0.7
Tmed1Q3V009 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.41■□□□□ 0.7
Tmed1Q3V009 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tmed1Q3V009 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tmed1Q3V009 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tmed1Q3V009 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Tmed1Q3V009 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tmed1Q3V009 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tmed1Q3V009 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tmed1Q3V009 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Tmed1Q3V009 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tmed1Q3V009 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Tmed1Q3V009 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tmed1Q3V009 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Tmed1Q3V009 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Tmed1Q3V009 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.4■□□□□ 0.7
Tmed1Q3V009 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tmed1Q3V009 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tmed1Q3V009 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.4■□□□□ 0.7
Tmed1Q3V009 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tmed1Q3V009 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tmed1Q3V009 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.39■□□□□ 0.7
Tmed1Q3V009 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.39■□□□□ 0.7
Tmed1Q3V009 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tmed1Q3V009 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tmed1Q3V009 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tmed1Q3V009 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Tmed1Q3V009 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tmed1Q3V009 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Tmed1Q3V009 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tmed1Q3V009 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tmed1Q3V009 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Tmed1Q3V009 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tmed1Q3V009 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tmed1Q3V009 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tmed1Q3V009 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Tmed1Q3V009 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tmed1Q3V009 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Tmed1Q3V009 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tmed1Q3V009 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tmed1Q3V009 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tmed1Q3V009 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tmed1Q3V009 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tmed1Q3V009 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tmed1Q3V009 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tmed1Q3V009 Cap2-205ENSMUST00000225824 1634 ntBASIC19.37■□□□□ 0.69
Tmed1Q3V009 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.37■□□□□ 0.69
Tmed1Q3V009 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.37■□□□□ 0.69
Tmed1Q3V009 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tmed1Q3V009 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tmed1Q3V009 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tmed1Q3V009 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Tmed1Q3V009 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.36■□□□□ 0.69
Tmed1Q3V009 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tmed1Q3V009 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tmed1Q3V009 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tmed1Q3V009 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 399.7 ms