Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm6365-201ENSMUST00000054711 744 ntBASIC20.19■□□□□ 0.82
Fam196aQ3USH1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Fam196aQ3USH1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Fam196aQ3USH1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Fam196aQ3USH1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fam196aQ3USH1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.18■□□□□ 0.82
Fam196aQ3USH1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Fam196aQ3USH1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fam196aQ3USH1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Fam196aQ3USH1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fam196aQ3USH1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Fam196aQ3USH1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Fam196aQ3USH1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Fam196aQ3USH1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fam196aQ3USH1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.17■□□□□ 0.82
Fam196aQ3USH1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam196aQ3USH1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam196aQ3USH1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam196aQ3USH1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam196aQ3USH1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Fam196aQ3USH1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.16■□□□□ 0.82
Fam196aQ3USH1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.16■□□□□ 0.82
Fam196aQ3USH1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.16■□□□□ 0.82
Fam196aQ3USH1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam196aQ3USH1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam196aQ3USH1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam196aQ3USH1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam196aQ3USH1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam196aQ3USH1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Fam196aQ3USH1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam196aQ3USH1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Fam196aQ3USH1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam196aQ3USH1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Fam196aQ3USH1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam196aQ3USH1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.15■□□□□ 0.82
Fam196aQ3USH1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Fam196aQ3USH1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam196aQ3USH1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.15■□□□□ 0.82
Fam196aQ3USH1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam196aQ3USH1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Fam196aQ3USH1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Fam196aQ3USH1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Fam196aQ3USH1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Fam196aQ3USH1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Fam196aQ3USH1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.14■□□□□ 0.81
Fam196aQ3USH1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Fam196aQ3USH1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
Fam196aQ3USH1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Fam196aQ3USH1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Fam196aQ3USH1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Fam196aQ3USH1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Fam196aQ3USH1 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.13■□□□□ 0.81
Fam196aQ3USH1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.13■□□□□ 0.81
Fam196aQ3USH1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.13■□□□□ 0.81
Fam196aQ3USH1 Trmt13-210ENSMUST00000198454 880 ntBASIC20.13■□□□□ 0.81
Fam196aQ3USH1 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.13■□□□□ 0.81
Fam196aQ3USH1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Fam196aQ3USH1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Fam196aQ3USH1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Fam196aQ3USH1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Fam196aQ3USH1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Fam196aQ3USH1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Fam196aQ3USH1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Fam196aQ3USH1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.12■□□□□ 0.81
Fam196aQ3USH1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Fam196aQ3USH1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Fam196aQ3USH1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Fam196aQ3USH1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Fam196aQ3USH1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Fam196aQ3USH1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Fam196aQ3USH1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Fam196aQ3USH1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Fam196aQ3USH1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Fam196aQ3USH1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Fam196aQ3USH1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Fam196aQ3USH1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.11■□□□□ 0.81
Fam196aQ3USH1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Fam196aQ3USH1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Fam196aQ3USH1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Fam196aQ3USH1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Fam196aQ3USH1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Fam196aQ3USH1 Mir6236-201ENSMUST00000184437 123 ntBASIC20.1■□□□□ 0.81
Fam196aQ3USH1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Fam196aQ3USH1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Fam196aQ3USH1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Fam196aQ3USH1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Fam196aQ3USH1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Fam196aQ3USH1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Fam196aQ3USH1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.09■□□□□ 0.81
Fam196aQ3USH1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Fam196aQ3USH1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Fam196aQ3USH1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Fam196aQ3USH1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Fam196aQ3USH1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Fam196aQ3USH1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Fam196aQ3USH1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Fam196aQ3USH1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Fam196aQ3USH1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Fam196aQ3USH1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.08■□□□□ 0.81
Fam196aQ3USH1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms