Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsmem1Q3UQS2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
Lsmem1Q3UQS2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsmem1Q3UQS2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lsmem1Q3UQS2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsmem1Q3UQS2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsmem1Q3UQS2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsmem1Q3UQS2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsmem1Q3UQS2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsmem1Q3UQS2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsmem1Q3UQS2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsmem1Q3UQS2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Lsmem1Q3UQS2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Lsmem1Q3UQS2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsmem1Q3UQS2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsmem1Q3UQS2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsmem1Q3UQS2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lsmem1Q3UQS2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lsmem1Q3UQS2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.27■□□□□ 0.83
Lsmem1Q3UQS2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lsmem1Q3UQS2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lsmem1Q3UQS2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lsmem1Q3UQS2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lsmem1Q3UQS2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lsmem1Q3UQS2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lsmem1Q3UQS2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lsmem1Q3UQS2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lsmem1Q3UQS2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lsmem1Q3UQS2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lsmem1Q3UQS2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Lsmem1Q3UQS2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsmem1Q3UQS2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsmem1Q3UQS2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Lsmem1Q3UQS2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsmem1Q3UQS2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsmem1Q3UQS2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsmem1Q3UQS2 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.25■□□□□ 0.83
Lsmem1Q3UQS2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.25■□□□□ 0.83
Lsmem1Q3UQS2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsmem1Q3UQS2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsmem1Q3UQS2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsmem1Q3UQS2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsmem1Q3UQS2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lsmem1Q3UQS2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lsmem1Q3UQS2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lsmem1Q3UQS2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lsmem1Q3UQS2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.24■□□□□ 0.83
Lsmem1Q3UQS2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Lsmem1Q3UQS2 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.24■□□□□ 0.83
Lsmem1Q3UQS2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lsmem1Q3UQS2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lsmem1Q3UQS2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.24■□□□□ 0.83
Lsmem1Q3UQS2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Lsmem1Q3UQS2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lsmem1Q3UQS2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Lsmem1Q3UQS2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsmem1Q3UQS2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.23■□□□□ 0.83
Lsmem1Q3UQS2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Lsmem1Q3UQS2 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.23■□□□□ 0.83
Lsmem1Q3UQS2 Spcs1-204ENSMUST00000226782 949 ntBASIC20.23■□□□□ 0.83
Lsmem1Q3UQS2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Lsmem1Q3UQS2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsmem1Q3UQS2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Lsmem1Q3UQS2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lsmem1Q3UQS2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsmem1Q3UQS2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Lsmem1Q3UQS2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsmem1Q3UQS2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lsmem1Q3UQS2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Lsmem1Q3UQS2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lsmem1Q3UQS2 Gm12251-201ENSMUST00000117893 792 ntBASIC20.22■□□□□ 0.83
Lsmem1Q3UQS2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Lsmem1Q3UQS2 Gm45417-201ENSMUST00000209533 758 ntBASIC20.22■□□□□ 0.83
Lsmem1Q3UQS2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lsmem1Q3UQS2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Lsmem1Q3UQS2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Lsmem1Q3UQS2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Lsmem1Q3UQS2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lsmem1Q3UQS2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Lsmem1Q3UQS2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Lsmem1Q3UQS2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lsmem1Q3UQS2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lsmem1Q3UQS2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Lsmem1Q3UQS2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lsmem1Q3UQS2 Mir7075-201ENSMUST00000184187 82 ntBASIC20.21■□□□□ 0.83
Lsmem1Q3UQS2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.21■□□□□ 0.83
Lsmem1Q3UQS2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Lsmem1Q3UQS2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lsmem1Q3UQS2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lsmem1Q3UQS2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.21■□□□□ 0.83
Lsmem1Q3UQS2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lsmem1Q3UQS2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lsmem1Q3UQS2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
Lsmem1Q3UQS2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lsmem1Q3UQS2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lsmem1Q3UQS2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lsmem1Q3UQS2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Lsmem1Q3UQS2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lsmem1Q3UQS2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lsmem1Q3UQS2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms