Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cks1brtQ3UNC9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cks1brtQ3UNC9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Cks1brtQ3UNC9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC14.41□□□□□ -0.1
Cks1brtQ3UNC9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Cks1brtQ3UNC9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cks1brtQ3UNC9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cks1brtQ3UNC9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cks1brtQ3UNC9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Cks1brtQ3UNC9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cks1brtQ3UNC9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cks1brtQ3UNC9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cks1brtQ3UNC9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cks1brtQ3UNC9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cks1brtQ3UNC9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cks1brtQ3UNC9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cks1brtQ3UNC9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cks1brtQ3UNC9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cks1brtQ3UNC9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cks1brtQ3UNC9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cks1brtQ3UNC9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cks1brtQ3UNC9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cks1brtQ3UNC9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cks1brtQ3UNC9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cks1brtQ3UNC9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cks1brtQ3UNC9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cks1brtQ3UNC9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cks1brtQ3UNC9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cks1brtQ3UNC9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cks1brtQ3UNC9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cks1brtQ3UNC9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cks1brtQ3UNC9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cks1brtQ3UNC9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.38□□□□□ -0.11
Cks1brtQ3UNC9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cks1brtQ3UNC9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.38□□□□□ -0.11
Cks1brtQ3UNC9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cks1brtQ3UNC9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Cks1brtQ3UNC9 AC153911.1-201ENSMUST00000220378 758 ntBASIC14.38□□□□□ -0.11
Cks1brtQ3UNC9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cks1brtQ3UNC9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cks1brtQ3UNC9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cks1brtQ3UNC9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cks1brtQ3UNC9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cks1brtQ3UNC9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cks1brtQ3UNC9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cks1brtQ3UNC9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cks1brtQ3UNC9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cks1brtQ3UNC9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cks1brtQ3UNC9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cks1brtQ3UNC9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cks1brtQ3UNC9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cks1brtQ3UNC9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cks1brtQ3UNC9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cks1brtQ3UNC9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cks1brtQ3UNC9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC14.37□□□□□ -0.11
Cks1brtQ3UNC9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Cks1brtQ3UNC9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC14.37□□□□□ -0.11
Cks1brtQ3UNC9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cks1brtQ3UNC9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cks1brtQ3UNC9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cks1brtQ3UNC9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cks1brtQ3UNC9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cks1brtQ3UNC9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cks1brtQ3UNC9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cks1brtQ3UNC9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cks1brtQ3UNC9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cks1brtQ3UNC9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cks1brtQ3UNC9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cks1brtQ3UNC9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cks1brtQ3UNC9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cks1brtQ3UNC9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cks1brtQ3UNC9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cks1brtQ3UNC9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cks1brtQ3UNC9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC14.36□□□□□ -0.11
Cks1brtQ3UNC9 Nkain2-201ENSMUST00000092602 558 ntBASIC14.36□□□□□ -0.11
Cks1brtQ3UNC9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cks1brtQ3UNC9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cks1brtQ3UNC9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cks1brtQ3UNC9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cks1brtQ3UNC9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cks1brtQ3UNC9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cks1brtQ3UNC9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cks1brtQ3UNC9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cks1brtQ3UNC9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cks1brtQ3UNC9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cks1brtQ3UNC9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cks1brtQ3UNC9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cks1brtQ3UNC9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cks1brtQ3UNC9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cks1brtQ3UNC9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.35□□□□□ -0.11
Cks1brtQ3UNC9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cks1brtQ3UNC9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cks1brtQ3UNC9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.35□□□□□ -0.11
Cks1brtQ3UNC9 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.35□□□□□ -0.11
Cks1brtQ3UNC9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cks1brtQ3UNC9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cks1brtQ3UNC9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cks1brtQ3UNC9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cks1brtQ3UNC9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cks1brtQ3UNC9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms