Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp30Q3UN04 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp30Q3UN04 Gm10849-201ENSMUST00000100397 618 ntBASIC20.09■□□□□ 0.81
Usp30Q3UN04 Gm7291-201ENSMUST00000199147 382 ntBASIC20.09■□□□□ 0.81
Usp30Q3UN04 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp30Q3UN04 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp30Q3UN04 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp30Q3UN04 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp30Q3UN04 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp30Q3UN04 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.08■□□□□ 0.81
Usp30Q3UN04 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp30Q3UN04 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp30Q3UN04 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp30Q3UN04 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp30Q3UN04 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Usp30Q3UN04 Gm26571-201ENSMUST00000181399 666 ntBASIC20.08■□□□□ 0.81
Usp30Q3UN04 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Usp30Q3UN04 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Usp30Q3UN04 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp30Q3UN04 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp30Q3UN04 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp30Q3UN04 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp30Q3UN04 Gm27405-201ENSMUST00000184201 112 ntBASIC20.07■□□□□ 0.8
Usp30Q3UN04 Gm42569-201ENSMUST00000200539 472 ntBASIC20.07■□□□□ 0.8
Usp30Q3UN04 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.07■□□□□ 0.8
Usp30Q3UN04 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp30Q3UN04 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp30Q3UN04 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp30Q3UN04 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp30Q3UN04 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp30Q3UN04 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Usp30Q3UN04 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Usp30Q3UN04 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.06■□□□□ 0.8
Usp30Q3UN04 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp30Q3UN04 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.05■□□□□ 0.8
Usp30Q3UN04 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp30Q3UN04 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp30Q3UN04 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp30Q3UN04 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Usp30Q3UN04 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp30Q3UN04 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Usp30Q3UN04 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp30Q3UN04 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp30Q3UN04 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.05■□□□□ 0.8
Usp30Q3UN04 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp30Q3UN04 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp30Q3UN04 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.04■□□□□ 0.8
Usp30Q3UN04 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp30Q3UN04 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Usp30Q3UN04 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Usp30Q3UN04 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp30Q3UN04 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp30Q3UN04 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp30Q3UN04 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp30Q3UN04 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp30Q3UN04 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp30Q3UN04 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.03■□□□□ 0.8
Usp30Q3UN04 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Usp30Q3UN04 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.03■□□□□ 0.8
Usp30Q3UN04 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp30Q3UN04 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Usp30Q3UN04 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Usp30Q3UN04 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp30Q3UN04 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp30Q3UN04 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp30Q3UN04 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp30Q3UN04 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.02■□□□□ 0.8
Usp30Q3UN04 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.02■□□□□ 0.8
Usp30Q3UN04 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp30Q3UN04 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp30Q3UN04 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Usp30Q3UN04 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Usp30Q3UN04 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp30Q3UN04 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Usp30Q3UN04 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.01■□□□□ 0.79
Usp30Q3UN04 Gm18671-201ENSMUST00000214826 683 ntBASIC20.01■□□□□ 0.79
Usp30Q3UN04 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.01■□□□□ 0.79
Usp30Q3UN04 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.01■□□□□ 0.79
Usp30Q3UN04 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
Usp30Q3UN04 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp30Q3UN04 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp30Q3UN04 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Usp30Q3UN04 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp30Q3UN04 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20■□□□□ 0.79
Usp30Q3UN04 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Usp30Q3UN04 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp30Q3UN04 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Usp30Q3UN04 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp30Q3UN04 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp30Q3UN04 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.99■□□□□ 0.79
Usp30Q3UN04 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Usp30Q3UN04 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.99■□□□□ 0.79
Usp30Q3UN04 Gm10033-202ENSMUST00000211874 928 ntBASIC19.99■□□□□ 0.79
Usp30Q3UN04 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp30Q3UN04 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Usp30Q3UN04 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp30Q3UN04 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp30Q3UN04 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp30Q3UN04 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Usp30Q3UN04 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms