Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Naf1Q3UMQ8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Naf1Q3UMQ8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Naf1Q3UMQ8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
Naf1Q3UMQ8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Naf1Q3UMQ8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Naf1Q3UMQ8 Smad6-203ENSMUST00000179458 273 ntBASIC20.29■□□□□ 0.84
Naf1Q3UMQ8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Naf1Q3UMQ8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Naf1Q3UMQ8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Naf1Q3UMQ8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Naf1Q3UMQ8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Naf1Q3UMQ8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.28■□□□□ 0.84
Naf1Q3UMQ8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Naf1Q3UMQ8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Naf1Q3UMQ8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.27■□□□□ 0.84
Naf1Q3UMQ8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Naf1Q3UMQ8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
Naf1Q3UMQ8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Naf1Q3UMQ8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Naf1Q3UMQ8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.27■□□□□ 0.84
Naf1Q3UMQ8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.27■□□□□ 0.84
Naf1Q3UMQ8 Gm40848-201ENSMUST00000221998 324 ntBASIC20.27■□□□□ 0.84
Naf1Q3UMQ8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Naf1Q3UMQ8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Naf1Q3UMQ8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Naf1Q3UMQ8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Naf1Q3UMQ8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Naf1Q3UMQ8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.26■□□□□ 0.83
Naf1Q3UMQ8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Naf1Q3UMQ8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.26■□□□□ 0.83
Naf1Q3UMQ8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.26■□□□□ 0.83
Naf1Q3UMQ8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Naf1Q3UMQ8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Naf1Q3UMQ8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Naf1Q3UMQ8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.25■□□□□ 0.83
Naf1Q3UMQ8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Naf1Q3UMQ8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.25■□□□□ 0.83
Naf1Q3UMQ8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Naf1Q3UMQ8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Naf1Q3UMQ8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Naf1Q3UMQ8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Naf1Q3UMQ8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.24■□□□□ 0.83
Naf1Q3UMQ8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Naf1Q3UMQ8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Naf1Q3UMQ8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Naf1Q3UMQ8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Naf1Q3UMQ8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Naf1Q3UMQ8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Naf1Q3UMQ8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Naf1Q3UMQ8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Naf1Q3UMQ8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Naf1Q3UMQ8 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.24■□□□□ 0.83
Naf1Q3UMQ8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Naf1Q3UMQ8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Naf1Q3UMQ8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Naf1Q3UMQ8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Naf1Q3UMQ8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Naf1Q3UMQ8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Naf1Q3UMQ8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Naf1Q3UMQ8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Naf1Q3UMQ8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Naf1Q3UMQ8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Naf1Q3UMQ8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Naf1Q3UMQ8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Naf1Q3UMQ8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Naf1Q3UMQ8 Gm43060-201ENSMUST00000200621 289 ntBASIC20.22■□□□□ 0.83
Naf1Q3UMQ8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Naf1Q3UMQ8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Naf1Q3UMQ8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Naf1Q3UMQ8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Naf1Q3UMQ8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Naf1Q3UMQ8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Naf1Q3UMQ8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Naf1Q3UMQ8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Naf1Q3UMQ8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Naf1Q3UMQ8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.21■□□□□ 0.83
Naf1Q3UMQ8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.21■□□□□ 0.83
Naf1Q3UMQ8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.21■□□□□ 0.83
Naf1Q3UMQ8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Naf1Q3UMQ8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Naf1Q3UMQ8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Naf1Q3UMQ8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
Naf1Q3UMQ8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Naf1Q3UMQ8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Naf1Q3UMQ8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Naf1Q3UMQ8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Naf1Q3UMQ8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Naf1Q3UMQ8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.19■□□□□ 0.82
Naf1Q3UMQ8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Naf1Q3UMQ8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Naf1Q3UMQ8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Naf1Q3UMQ8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.19■□□□□ 0.82
Naf1Q3UMQ8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Naf1Q3UMQ8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Naf1Q3UMQ8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.19■□□□□ 0.82
Naf1Q3UMQ8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Naf1Q3UMQ8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Naf1Q3UMQ8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Naf1Q3UMQ8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms