Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hspg2Q05793 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC14.96□□□□□ -0.01
Hspg2Q05793 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hspg2Q05793 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hspg2Q05793 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hspg2Q05793 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hspg2Q05793 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hspg2Q05793 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Hspg2Q05793 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.96□□□□□ -0.01
Hspg2Q05793 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Hspg2Q05793 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hspg2Q05793 Gm20760-201ENSMUST00000179197 648 ntBASIC14.95□□□□□ -0.02
Hspg2Q05793 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Hspg2Q05793 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Hspg2Q05793 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hspg2Q05793 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hspg2Q05793 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hspg2Q05793 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.95□□□□□ -0.02
Hspg2Q05793 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hspg2Q05793 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hspg2Q05793 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hspg2Q05793 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hspg2Q05793 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Hspg2Q05793 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hspg2Q05793 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Hspg2Q05793 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hspg2Q05793 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hspg2Q05793 Gm4968-201ENSMUST00000071458 858 ntBASIC14.94□□□□□ -0.02
Hspg2Q05793 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.94□□□□□ -0.02
Hspg2Q05793 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hspg2Q05793 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hspg2Q05793 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Hspg2Q05793 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hspg2Q05793 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hspg2Q05793 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hspg2Q05793 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.94□□□□□ -0.02
Hspg2Q05793 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hspg2Q05793 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Hspg2Q05793 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.93□□□□□ -0.02
Hspg2Q05793 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hspg2Q05793 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hspg2Q05793 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hspg2Q05793 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hspg2Q05793 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hspg2Q05793 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hspg2Q05793 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hspg2Q05793 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hspg2Q05793 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.93□□□□□ -0.02
Hspg2Q05793 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hspg2Q05793 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hspg2Q05793 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hspg2Q05793 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hspg2Q05793 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hspg2Q05793 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Hspg2Q05793 Gm7514-201ENSMUST00000209475 934 ntBASIC14.92□□□□□ -0.02
Hspg2Q05793 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Hspg2Q05793 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hspg2Q05793 Gm13234-201ENSMUST00000120010 747 ntBASIC14.92□□□□□ -0.02
Hspg2Q05793 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.92□□□□□ -0.02
Hspg2Q05793 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hspg2Q05793 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hspg2Q05793 Gm42418-201ENSMUST00000182010 1831 ntBASIC14.91□□□□□ -0.02
Hspg2Q05793 Gm13168-201ENSMUST00000121771 632 ntBASIC14.91□□□□□ -0.02
Hspg2Q05793 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hspg2Q05793 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hspg2Q05793 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Hspg2Q05793 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.91□□□□□ -0.02
Hspg2Q05793 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hspg2Q05793 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.91□□□□□ -0.02
Hspg2Q05793 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hspg2Q05793 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hspg2Q05793 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hspg2Q05793 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Hspg2Q05793 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hspg2Q05793 Gm12441-201ENSMUST00000121806 588 ntBASIC14.91□□□□□ -0.02
Hspg2Q05793 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hspg2Q05793 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hspg2Q05793 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC14.9□□□□□ -0.02
Hspg2Q05793 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hspg2Q05793 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hspg2Q05793 Mir6982-201ENSMUST00000184354 68 ntBASIC14.9□□□□□ -0.02
Hspg2Q05793 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Hspg2Q05793 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hspg2Q05793 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Hspg2Q05793 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hspg2Q05793 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hspg2Q05793 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hspg2Q05793 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hspg2Q05793 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hspg2Q05793 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hspg2Q05793 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hspg2Q05793 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Hspg2Q05793 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hspg2Q05793 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hspg2Q05793 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hspg2Q05793 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.89□□□□□ -0.03
Hspg2Q05793 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.89□□□□□ -0.03
Hspg2Q05793 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC14.89□□□□□ -0.03
Hspg2Q05793 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Hspg2Q05793 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms