Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.24■□□□□ 0.83
Smad4P97471 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.24■□□□□ 0.83
Smad4P97471 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smad4P97471 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smad4P97471 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smad4P97471 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Smad4P97471 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smad4P97471 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smad4P97471 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smad4P97471 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smad4P97471 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.22■□□□□ 0.83
Smad4P97471 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.22■□□□□ 0.83
Smad4P97471 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.22■□□□□ 0.83
Smad4P97471 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.22■□□□□ 0.83
Smad4P97471 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smad4P97471 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smad4P97471 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.22■□□□□ 0.83
Smad4P97471 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smad4P97471 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smad4P97471 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smad4P97471 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.21■□□□□ 0.83
Smad4P97471 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smad4P97471 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Smad4P97471 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smad4P97471 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smad4P97471 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smad4P97471 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smad4P97471 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smad4P97471 Gm13146-201ENSMUST00000118508 780 ntBASIC20.2■□□□□ 0.82
Smad4P97471 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.2■□□□□ 0.82
Smad4P97471 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smad4P97471 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smad4P97471 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smad4P97471 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smad4P97471 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smad4P97471 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.19■□□□□ 0.82
Smad4P97471 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.19■□□□□ 0.82
Smad4P97471 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Smad4P97471 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Smad4P97471 Trmt13-210ENSMUST00000198454 880 ntBASIC20.19■□□□□ 0.82
Smad4P97471 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.19■□□□□ 0.82
Smad4P97471 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smad4P97471 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smad4P97471 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smad4P97471 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smad4P97471 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smad4P97471 Gm13836-201ENSMUST00000121159 501 ntBASIC20.18■□□□□ 0.82
Smad4P97471 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Smad4P97471 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smad4P97471 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smad4P97471 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smad4P97471 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.17■□□□□ 0.82
Smad4P97471 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Smad4P97471 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.17■□□□□ 0.82
Smad4P97471 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smad4P97471 Gm6211-202ENSMUST00000167849 925 ntBASIC20.17■□□□□ 0.82
Smad4P97471 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smad4P97471 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smad4P97471 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smad4P97471 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smad4P97471 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smad4P97471 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smad4P97471 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smad4P97471 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smad4P97471 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smad4P97471 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smad4P97471 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smad4P97471 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smad4P97471 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.16■□□□□ 0.82
Smad4P97471 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Smad4P97471 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.16■□□□□ 0.82
Smad4P97471 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smad4P97471 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smad4P97471 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Smad4P97471 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smad4P97471 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Smad4P97471 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Smad4P97471 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smad4P97471 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Smad4P97471 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smad4P97471 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.15■□□□□ 0.82
Smad4P97471 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smad4P97471 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smad4P97471 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smad4P97471 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smad4P97471 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Smad4P97471 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smad4P97471 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smad4P97471 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smad4P97471 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smad4P97471 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smad4P97471 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smad4P97471 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smad4P97471 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.13■□□□□ 0.81
Smad4P97471 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.13■□□□□ 0.81
Smad4P97471 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smad4P97471 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smad4P97471 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smad4P97471 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smad4P97471 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms