Protein–RNA interactions for Protein: P70671

Irf3, Interferon regulatory factor 3, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf3P70671 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.8■■□□□ 1.08
Irf3P70671 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Irf3P70671 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.79■■□□□ 1.08
Irf3P70671 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Irf3P70671 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.79■■□□□ 1.08
Irf3P70671 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Irf3P70671 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Irf3P70671 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Irf3P70671 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Irf3P70671 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Irf3P70671 Gm10493-201ENSMUST00000097270 612 ntBASIC21.79■■□□□ 1.08
Irf3P70671 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Irf3P70671 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Irf3P70671 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Irf3P70671 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Irf3P70671 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Irf3P70671 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Irf3P70671 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Irf3P70671 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.78■■□□□ 1.08
Irf3P70671 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
Irf3P70671 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Irf3P70671 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
Irf3P70671 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.78■■□□□ 1.08
Irf3P70671 Gm5874-201ENSMUST00000096101 508 ntBASIC21.78■■□□□ 1.08
Irf3P70671 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Irf3P70671 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Irf3P70671 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Irf3P70671 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Irf3P70671 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Irf3P70671 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
Irf3P70671 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Irf3P70671 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Irf3P70671 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Irf3P70671 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Irf3P70671 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Irf3P70671 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.76■■□□□ 1.07
Irf3P70671 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.76■■□□□ 1.07
Irf3P70671 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Irf3P70671 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Irf3P70671 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Irf3P70671 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.75■■□□□ 1.07
Irf3P70671 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Irf3P70671 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Irf3P70671 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Irf3P70671 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Irf3P70671 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.75■■□□□ 1.07
Irf3P70671 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Irf3P70671 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Irf3P70671 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Irf3P70671 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Irf3P70671 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Irf3P70671 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Irf3P70671 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Irf3P70671 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.74■■□□□ 1.07
Irf3P70671 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Irf3P70671 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Irf3P70671 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Irf3P70671 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Irf3P70671 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.73■■□□□ 1.07
Irf3P70671 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Irf3P70671 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Irf3P70671 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Irf3P70671 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Irf3P70671 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Irf3P70671 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Irf3P70671 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Irf3P70671 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Irf3P70671 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Irf3P70671 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Irf3P70671 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Irf3P70671 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.73■■□□□ 1.07
Irf3P70671 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.73■■□□□ 1.07
Irf3P70671 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Irf3P70671 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Irf3P70671 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Irf3P70671 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Irf3P70671 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.72■■□□□ 1.07
Irf3P70671 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Irf3P70671 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.72■■□□□ 1.07
Irf3P70671 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Irf3P70671 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Irf3P70671 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Irf3P70671 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Irf3P70671 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Irf3P70671 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Irf3P70671 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Irf3P70671 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
Irf3P70671 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Irf3P70671 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Irf3P70671 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.71■■□□□ 1.07
Irf3P70671 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Irf3P70671 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Irf3P70671 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Irf3P70671 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Irf3P70671 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Irf3P70671 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Irf3P70671 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.7■■□□□ 1.06
Irf3P70671 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
Irf3P70671 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Irf3P70671 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms