Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six5P70178 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six5P70178 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Six5P70178 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six5P70178 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six5P70178 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six5P70178 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.6■□□□□ 0.57
Six5P70178 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.6■□□□□ 0.57
Six5P70178 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six5P70178 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Six5P70178 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six5P70178 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six5P70178 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.6■□□□□ 0.57
Six5P70178 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six5P70178 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six5P70178 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Six5P70178 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six5P70178 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six5P70178 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
Six5P70178 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Six5P70178 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six5P70178 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
Six5P70178 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.59■□□□□ 0.57
Six5P70178 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six5P70178 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Six5P70178 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six5P70178 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
Six5P70178 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
Six5P70178 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.58■□□□□ 0.57
Six5P70178 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.58■□□□□ 0.56
Six5P70178 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Six5P70178 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Six5P70178 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Six5P70178 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Six5P70178 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Six5P70178 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Six5P70178 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Six5P70178 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Six5P70178 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six5P70178 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six5P70178 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six5P70178 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six5P70178 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.57■□□□□ 0.56
Six5P70178 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.57■□□□□ 0.56
Six5P70178 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Six5P70178 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six5P70178 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Six5P70178 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six5P70178 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six5P70178 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six5P70178 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.56■□□□□ 0.56
Six5P70178 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.56■□□□□ 0.56
Six5P70178 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Six5P70178 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
Six5P70178 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six5P70178 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Six5P70178 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six5P70178 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six5P70178 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Six5P70178 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six5P70178 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Six5P70178 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six5P70178 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.55■□□□□ 0.56
Six5P70178 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Six5P70178 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.55■□□□□ 0.56
Six5P70178 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six5P70178 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Six5P70178 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six5P70178 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Six5P70178 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Six5P70178 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six5P70178 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six5P70178 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six5P70178 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.54■□□□□ 0.56
Six5P70178 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.54■□□□□ 0.56
Six5P70178 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Six5P70178 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six5P70178 Gm21956-201ENSMUST00000179946 522 ntBASIC18.54■□□□□ 0.56
Six5P70178 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six5P70178 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Six5P70178 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Six5P70178 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Six5P70178 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six5P70178 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six5P70178 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.53■□□□□ 0.56
Six5P70178 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six5P70178 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Six5P70178 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.53■□□□□ 0.56
Six5P70178 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.53■□□□□ 0.56
Six5P70178 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.53■□□□□ 0.56
Six5P70178 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six5P70178 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six5P70178 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Six5P70178 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Six5P70178 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Six5P70178 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.52■□□□□ 0.56
Six5P70178 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Six5P70178 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.52■□□□□ 0.56
Six5P70178 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Six5P70178 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms