Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Crnkl1P63154 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Crnkl1P63154 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Crnkl1P63154 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Crnkl1P63154 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.58■□□□□ 0.72
Crnkl1P63154 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Crnkl1P63154 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.58■□□□□ 0.72
Crnkl1P63154 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Crnkl1P63154 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Crnkl1P63154 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Crnkl1P63154 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Crnkl1P63154 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Crnkl1P63154 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Crnkl1P63154 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Crnkl1P63154 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Crnkl1P63154 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Crnkl1P63154 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Crnkl1P63154 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Crnkl1P63154 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Crnkl1P63154 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Crnkl1P63154 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Crnkl1P63154 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Crnkl1P63154 Golph3-205ENSMUST00000228671 2842 ntBASIC19.57■□□□□ 0.72
Crnkl1P63154 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Crnkl1P63154 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Crnkl1P63154 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Crnkl1P63154 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.56■□□□□ 0.72
Crnkl1P63154 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.56■□□□□ 0.72
Crnkl1P63154 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Crnkl1P63154 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Crnkl1P63154 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Crnkl1P63154 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Crnkl1P63154 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Crnkl1P63154 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Crnkl1P63154 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Crnkl1P63154 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Crnkl1P63154 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Crnkl1P63154 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Crnkl1P63154 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Crnkl1P63154 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Crnkl1P63154 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Crnkl1P63154 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.55■□□□□ 0.72
Crnkl1P63154 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Crnkl1P63154 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Crnkl1P63154 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Crnkl1P63154 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.54■□□□□ 0.72
Crnkl1P63154 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Crnkl1P63154 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Crnkl1P63154 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Crnkl1P63154 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Crnkl1P63154 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.54■□□□□ 0.72
Crnkl1P63154 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.54■□□□□ 0.72
Crnkl1P63154 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Crnkl1P63154 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Crnkl1P63154 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Crnkl1P63154 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Crnkl1P63154 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Crnkl1P63154 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Crnkl1P63154 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Crnkl1P63154 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Crnkl1P63154 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Crnkl1P63154 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Crnkl1P63154 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Crnkl1P63154 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.53■□□□□ 0.72
Crnkl1P63154 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Crnkl1P63154 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Crnkl1P63154 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Crnkl1P63154 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Crnkl1P63154 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.53■□□□□ 0.72
Crnkl1P63154 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Crnkl1P63154 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Crnkl1P63154 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Crnkl1P63154 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Crnkl1P63154 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.52■□□□□ 0.72
Crnkl1P63154 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Crnkl1P63154 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Crnkl1P63154 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Crnkl1P63154 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Crnkl1P63154 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Crnkl1P63154 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Crnkl1P63154 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Crnkl1P63154 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Crnkl1P63154 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Crnkl1P63154 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Crnkl1P63154 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Crnkl1P63154 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.51■□□□□ 0.71
Crnkl1P63154 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.51■□□□□ 0.71
Crnkl1P63154 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Crnkl1P63154 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.51■□□□□ 0.71
Crnkl1P63154 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.51■□□□□ 0.71
Crnkl1P63154 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Crnkl1P63154 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Crnkl1P63154 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
Crnkl1P63154 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Crnkl1P63154 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Crnkl1P63154 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Crnkl1P63154 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Crnkl1P63154 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.5■□□□□ 0.71
Crnkl1P63154 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Crnkl1P63154 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms