Protein–RNA interactions for Protein: P62984

Uba52, Ubiquitin-60S ribosomal protein L40, mousemouse

Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba52P62984 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.14■□□□□ 0.33
Uba52P62984 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba52P62984 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Uba52P62984 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Uba52P62984 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba52P62984 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba52P62984 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba52P62984 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Uba52P62984 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba52P62984 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba52P62984 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.14■□□□□ 0.33
Uba52P62984 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.14■□□□□ 0.33
Uba52P62984 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba52P62984 Gm9847-201ENSMUST00000052528 599 ntBASIC17.14■□□□□ 0.33
Uba52P62984 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba52P62984 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba52P62984 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.14■□□□□ 0.33
Uba52P62984 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba52P62984 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uba52P62984 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.13■□□□□ 0.33
Uba52P62984 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Uba52P62984 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uba52P62984 Gm40881-201ENSMUST00000223397 166 ntBASIC17.13■□□□□ 0.33
Uba52P62984 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uba52P62984 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uba52P62984 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uba52P62984 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uba52P62984 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Uba52P62984 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uba52P62984 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uba52P62984 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Uba52P62984 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Uba52P62984 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Uba52P62984 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Uba52P62984 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Uba52P62984 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Uba52P62984 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Uba52P62984 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Uba52P62984 Gm22238-201ENSMUST00000175222 88 ntBASIC17.12■□□□□ 0.33
Uba52P62984 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.12■□□□□ 0.33
Uba52P62984 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.12■□□□□ 0.33
Uba52P62984 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Uba52P62984 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Uba52P62984 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Uba52P62984 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Uba52P62984 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Uba52P62984 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Uba52P62984 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Uba52P62984 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Uba52P62984 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Uba52P62984 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Uba52P62984 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Uba52P62984 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Uba52P62984 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Uba52P62984 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Uba52P62984 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Uba52P62984 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Uba52P62984 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Uba52P62984 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Uba52P62984 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Uba52P62984 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Uba52P62984 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Uba52P62984 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.1■□□□□ 0.33
Uba52P62984 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Uba52P62984 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.1■□□□□ 0.33
Uba52P62984 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Uba52P62984 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Uba52P62984 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Uba52P62984 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Uba52P62984 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.1■□□□□ 0.33
Uba52P62984 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Uba52P62984 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
Uba52P62984 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Uba52P62984 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Uba52P62984 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Uba52P62984 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Uba52P62984 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.09■□□□□ 0.33
Uba52P62984 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Uba52P62984 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Uba52P62984 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.09■□□□□ 0.33
Uba52P62984 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Uba52P62984 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Uba52P62984 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Uba52P62984 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.09■□□□□ 0.33
Uba52P62984 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Uba52P62984 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Uba52P62984 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Uba52P62984 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Uba52P62984 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.33
Uba52P62984 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Uba52P62984 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Uba52P62984 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Uba52P62984 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Uba52P62984 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Uba52P62984 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Uba52P62984 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Uba52P62984 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Uba52P62984 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Uba52P62984 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Uba52P62984 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms