Protein–RNA interactions for Protein: P61249

Pde6h, Retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, mousemouse

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6hP61249 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pde6hP61249 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pde6hP61249 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pde6hP61249 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pde6hP61249 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.18■□□□□ 0.02
Pde6hP61249 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.18■□□□□ 0.02
Pde6hP61249 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pde6hP61249 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pde6hP61249 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6hP61249 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6hP61249 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6hP61249 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6hP61249 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6hP61249 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6hP61249 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6hP61249 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6hP61249 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6hP61249 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6hP61249 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6hP61249 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6hP61249 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.16■□□□□ 0.02
Pde6hP61249 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pde6hP61249 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pde6hP61249 Gm13238-201ENSMUST00000117655 780 ntBASIC15.16■□□□□ 0.02
Pde6hP61249 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.16■□□□□ 0.02
Pde6hP61249 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Pde6hP61249 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pde6hP61249 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pde6hP61249 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pde6hP61249 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pde6hP61249 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Pde6hP61249 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pde6hP61249 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pde6hP61249 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6hP61249 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Pde6hP61249 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6hP61249 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6hP61249 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6hP61249 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.15■□□□□ 0.02
Pde6hP61249 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6hP61249 Mir6236-201ENSMUST00000184437 123 ntBASIC15.15■□□□□ 0.02
Pde6hP61249 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.15■□□□□ 0.02
Pde6hP61249 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6hP61249 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6hP61249 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6hP61249 Iqck-206ENSMUST00000208658 2891 ntBASIC15.14■□□□□ 0.01
Pde6hP61249 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6hP61249 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6hP61249 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6hP61249 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6hP61249 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6hP61249 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6hP61249 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6hP61249 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pde6hP61249 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6hP61249 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.14■□□□□ 0.01
Pde6hP61249 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6hP61249 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pde6hP61249 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pde6hP61249 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6hP61249 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pde6hP61249 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.13■□□□□ 0.01
Pde6hP61249 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6hP61249 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6hP61249 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6hP61249 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6hP61249 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Pde6hP61249 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6hP61249 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6hP61249 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pde6hP61249 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6hP61249 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Pde6hP61249 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6hP61249 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6hP61249 Cap2-205ENSMUST00000225824 1634 ntBASIC15.12■□□□□ 0.01
Pde6hP61249 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6hP61249 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.12■□□□□ 0.01
Pde6hP61249 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6hP61249 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6hP61249 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6hP61249 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6hP61249 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.12■□□□□ 0.01
Pde6hP61249 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pde6hP61249 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pde6hP61249 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pde6hP61249 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pde6hP61249 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pde6hP61249 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pde6hP61249 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pde6hP61249 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pde6hP61249 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pde6hP61249 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pde6hP61249 Gm40881-201ENSMUST00000223397 166 ntBASIC15.11■□□□□ 0.01
Pde6hP61249 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pde6hP61249 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pde6hP61249 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pde6hP61249 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.11■□□□□ 0.01
Pde6hP61249 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pde6hP61249 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pde6hP61249 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms