Protein–RNA interactions for Protein: P60334

Cdo1, Cysteine dioxygenase type 1, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdo1P60334 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdo1P60334 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.53■□□□□ 0.88
Cdo1P60334 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.53■□□□□ 0.88
Cdo1P60334 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Cdo1P60334 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdo1P60334 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.53■□□□□ 0.88
Cdo1P60334 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cdo1P60334 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cdo1P60334 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Cdo1P60334 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdo1P60334 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdo1P60334 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdo1P60334 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdo1P60334 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Cdo1P60334 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdo1P60334 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdo1P60334 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdo1P60334 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Cdo1P60334 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdo1P60334 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Cdo1P60334 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdo1P60334 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdo1P60334 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdo1P60334 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.51■□□□□ 0.87
Cdo1P60334 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cdo1P60334 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdo1P60334 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdo1P60334 Gm12922-201ENSMUST00000120626 809 ntBASIC20.5■□□□□ 0.87
Cdo1P60334 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.5■□□□□ 0.87
Cdo1P60334 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdo1P60334 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdo1P60334 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdo1P60334 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdo1P60334 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdo1P60334 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Cdo1P60334 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.49■□□□□ 0.87
Cdo1P60334 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdo1P60334 Mir6236-201ENSMUST00000184437 123 ntBASIC20.49■□□□□ 0.87
Cdo1P60334 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdo1P60334 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdo1P60334 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdo1P60334 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdo1P60334 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.49■□□□□ 0.87
Cdo1P60334 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdo1P60334 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Cdo1P60334 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdo1P60334 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdo1P60334 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdo1P60334 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cdo1P60334 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdo1P60334 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cdo1P60334 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.48■□□□□ 0.87
Cdo1P60334 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdo1P60334 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Cdo1P60334 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdo1P60334 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Cdo1P60334 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdo1P60334 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdo1P60334 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cdo1P60334 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdo1P60334 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cdo1P60334 Gm9847-201ENSMUST00000052528 599 ntBASIC20.47■□□□□ 0.87
Cdo1P60334 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.47■□□□□ 0.87
Cdo1P60334 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdo1P60334 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.46■□□□□ 0.87
Cdo1P60334 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Cdo1P60334 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.46■□□□□ 0.87
Cdo1P60334 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdo1P60334 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cdo1P60334 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cdo1P60334 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cdo1P60334 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdo1P60334 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cdo1P60334 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdo1P60334 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdo1P60334 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Cdo1P60334 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdo1P60334 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.45■□□□□ 0.86
Cdo1P60334 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdo1P60334 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdo1P60334 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdo1P60334 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdo1P60334 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdo1P60334 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Cdo1P60334 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdo1P60334 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdo1P60334 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.44■□□□□ 0.86
Cdo1P60334 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
Cdo1P60334 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cdo1P60334 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdo1P60334 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdo1P60334 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.44■□□□□ 0.86
Cdo1P60334 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdo1P60334 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdo1P60334 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Cdo1P60334 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdo1P60334 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdo1P60334 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdo1P60334 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdo1P60334 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms