Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Limk1P53668 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Limk1P53668 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Limk1P53668 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Limk1P53668 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Limk1P53668 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Limk1P53668 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Limk1P53668 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Limk1P53668 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Limk1P53668 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.5■□□□□ 0.71
Limk1P53668 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Limk1P53668 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Limk1P53668 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Limk1P53668 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.5■□□□□ 0.71
Limk1P53668 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Limk1P53668 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Limk1P53668 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.5■□□□□ 0.71
Limk1P53668 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Limk1P53668 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Limk1P53668 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.49■□□□□ 0.71
Limk1P53668 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Limk1P53668 Gm10653-202ENSMUST00000139570 835 ntBASIC19.49■□□□□ 0.71
Limk1P53668 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.49■□□□□ 0.71
Limk1P53668 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Limk1P53668 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Limk1P53668 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Limk1P53668 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Limk1P53668 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Limk1P53668 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Limk1P53668 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Limk1P53668 Gm22240-201ENSMUST00000175225 82 ntBASIC19.48■□□□□ 0.71
Limk1P53668 Gm20760-201ENSMUST00000179197 648 ntBASIC19.48■□□□□ 0.71
Limk1P53668 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.48■□□□□ 0.71
Limk1P53668 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Limk1P53668 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Limk1P53668 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Limk1P53668 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Limk1P53668 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.48■□□□□ 0.71
Limk1P53668 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Limk1P53668 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.48■□□□□ 0.71
Limk1P53668 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Limk1P53668 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.46■□□□□ 0.71
Limk1P53668 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.46■□□□□ 0.71
Limk1P53668 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Limk1P53668 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.46■□□□□ 0.71
Limk1P53668 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.46■□□□□ 0.71
Limk1P53668 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Limk1P53668 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.46■□□□□ 0.71
Limk1P53668 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.46■□□□□ 0.71
Limk1P53668 Gm10252-201ENSMUST00000209541 832 ntBASIC19.46■□□□□ 0.71
Limk1P53668 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.46■□□□□ 0.71
Limk1P53668 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Limk1P53668 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Limk1P53668 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Limk1P53668 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Limk1P53668 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.45■□□□□ 0.7
Limk1P53668 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Limk1P53668 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.45■□□□□ 0.7
Limk1P53668 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.45■□□□□ 0.7
Limk1P53668 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Limk1P53668 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Limk1P53668 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Limk1P53668 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Limk1P53668 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Limk1P53668 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Limk1P53668 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limk1P53668 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limk1P53668 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limk1P53668 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limk1P53668 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limk1P53668 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limk1P53668 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Limk1P53668 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.44■□□□□ 0.7
Limk1P53668 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Limk1P53668 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limk1P53668 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limk1P53668 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limk1P53668 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Limk1P53668 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Limk1P53668 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Limk1P53668 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Limk1P53668 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Limk1P53668 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Limk1P53668 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Limk1P53668 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Limk1P53668 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Limk1P53668 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Limk1P53668 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Limk1P53668 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Limk1P53668 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Limk1P53668 Gm9988-201ENSMUST00000069786 435 ntBASIC19.42■□□□□ 0.7
Limk1P53668 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Limk1P53668 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.42■□□□□ 0.7
Limk1P53668 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Limk1P53668 Notumos-201ENSMUST00000151998 2659 ntBASIC19.42■□□□□ 0.7
Limk1P53668 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Limk1P53668 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Limk1P53668 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Limk1P53668 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Limk1P53668 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms