Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lbx1P52955 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lbx1P52955 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lbx1P52955 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lbx1P52955 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Lbx1P52955 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lbx1P52955 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Lbx1P52955 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Lbx1P52955 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lbx1P52955 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lbx1P52955 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lbx1P52955 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lbx1P52955 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lbx1P52955 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lbx1P52955 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lbx1P52955 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lbx1P52955 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Lbx1P52955 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.42■□□□□ 0.7
Lbx1P52955 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Lbx1P52955 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lbx1P52955 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.42■□□□□ 0.7
Lbx1P52955 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lbx1P52955 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lbx1P52955 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lbx1P52955 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.41■□□□□ 0.7
Lbx1P52955 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.41■□□□□ 0.7
Lbx1P52955 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.41■□□□□ 0.7
Lbx1P52955 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lbx1P52955 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lbx1P52955 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lbx1P52955 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lbx1P52955 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Lbx1P52955 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lbx1P52955 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lbx1P52955 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lbx1P52955 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lbx1P52955 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lbx1P52955 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.4■□□□□ 0.7
Lbx1P52955 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.4■□□□□ 0.7
Lbx1P52955 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Lbx1P52955 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lbx1P52955 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lbx1P52955 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lbx1P52955 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lbx1P52955 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Lbx1P52955 Gm6211-202ENSMUST00000167849 925 ntBASIC19.39■□□□□ 0.69
Lbx1P52955 Gm37055-201ENSMUST00000191866 133 ntBASIC19.39■□□□□ 0.69
Lbx1P52955 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Lbx1P52955 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lbx1P52955 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lbx1P52955 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Lbx1P52955 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.39■□□□□ 0.69
Lbx1P52955 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lbx1P52955 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lbx1P52955 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Lbx1P52955 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.39■□□□□ 0.69
Lbx1P52955 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.38■□□□□ 0.69
Lbx1P52955 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lbx1P52955 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.38■□□□□ 0.69
Lbx1P52955 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Lbx1P52955 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lbx1P52955 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lbx1P52955 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lbx1P52955 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lbx1P52955 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lbx1P52955 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lbx1P52955 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Lbx1P52955 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lbx1P52955 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lbx1P52955 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.37■□□□□ 0.69
Lbx1P52955 Gm27275-201ENSMUST00000184318 272 ntBASIC19.37■□□□□ 0.69
Lbx1P52955 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lbx1P52955 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lbx1P52955 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lbx1P52955 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.36■□□□□ 0.69
Lbx1P52955 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Lbx1P52955 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lbx1P52955 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lbx1P52955 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lbx1P52955 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lbx1P52955 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lbx1P52955 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lbx1P52955 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lbx1P52955 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lbx1P52955 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lbx1P52955 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Lbx1P52955 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lbx1P52955 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Lbx1P52955 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.34■□□□□ 0.69
Lbx1P52955 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Lbx1P52955 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Lbx1P52955 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lbx1P52955 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lbx1P52955 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.34■□□□□ 0.69
Lbx1P52955 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lbx1P52955 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Lbx1P52955 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lbx1P52955 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Lbx1P52955 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Lbx1P52955 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms