Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SqleP52019 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SqleP52019 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SqleP52019 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SqleP52019 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SqleP52019 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.87■■□□□ 1.09
SqleP52019 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SqleP52019 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.87■■□□□ 1.09
SqleP52019 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SqleP52019 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SqleP52019 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SqleP52019 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SqleP52019 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SqleP52019 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.86■■□□□ 1.09
SqleP52019 Gm6365-201ENSMUST00000054711 744 ntBASIC21.86■■□□□ 1.09
SqleP52019 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SqleP52019 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SqleP52019 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.85■■□□□ 1.09
SqleP52019 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.85■■□□□ 1.09
SqleP52019 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SqleP52019 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
SqleP52019 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SqleP52019 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SqleP52019 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SqleP52019 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.84■■□□□ 1.09
SqleP52019 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.84■■□□□ 1.09
SqleP52019 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.84■■□□□ 1.09
SqleP52019 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.84■■□□□ 1.09
SqleP52019 Mir6236-201ENSMUST00000184437 123 ntBASIC21.84■■□□□ 1.09
SqleP52019 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SqleP52019 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
SqleP52019 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SqleP52019 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.83■■□□□ 1.09
SqleP52019 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.83■■□□□ 1.09
SqleP52019 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SqleP52019 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
SqleP52019 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
SqleP52019 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SqleP52019 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SqleP52019 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SqleP52019 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SqleP52019 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SqleP52019 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SqleP52019 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SqleP52019 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SqleP52019 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SqleP52019 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SqleP52019 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.81■■□□□ 1.08
SqleP52019 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.81■■□□□ 1.08
SqleP52019 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.81■■□□□ 1.08
SqleP52019 Gm37856-201ENSMUST00000191634 999 ntBASIC21.81■■□□□ 1.08
SqleP52019 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.81■■□□□ 1.08
SqleP52019 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SqleP52019 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SqleP52019 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SqleP52019 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SqleP52019 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SqleP52019 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.8■■□□□ 1.08
SqleP52019 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.8■■□□□ 1.08
SqleP52019 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.8■■□□□ 1.08
SqleP52019 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.8■■□□□ 1.08
SqleP52019 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SqleP52019 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
SqleP52019 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SqleP52019 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SqleP52019 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SqleP52019 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SqleP52019 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.79■■□□□ 1.08
SqleP52019 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SqleP52019 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SqleP52019 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.79■■□□□ 1.08
SqleP52019 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.79■■□□□ 1.08
SqleP52019 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SqleP52019 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SqleP52019 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SqleP52019 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SqleP52019 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SqleP52019 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SqleP52019 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SqleP52019 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SqleP52019 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SqleP52019 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SqleP52019 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SqleP52019 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SqleP52019 Gm13836-201ENSMUST00000121159 501 ntBASIC21.77■■□□□ 1.08
SqleP52019 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SqleP52019 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SqleP52019 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SqleP52019 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SqleP52019 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SqleP52019 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SqleP52019 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SqleP52019 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.76■■□□□ 1.07
SqleP52019 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SqleP52019 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SqleP52019 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SqleP52019 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.75■■□□□ 1.07
SqleP52019 Trmt13-210ENSMUST00000198454 880 ntBASIC21.75■■□□□ 1.07
SqleP52019 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.75■■□□□ 1.07
SqleP52019 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms