Protein–RNA interactions for Protein: P51906

Slc1a1, Excitatory amino acid transporter 3, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a1P51906 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc1a1P51906 Gm43530-201ENSMUST00000195920 274 ntBASIC20.93■□□□□ 0.94
Slc1a1P51906 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc1a1P51906 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc1a1P51906 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Slc1a1P51906 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc1a1P51906 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc1a1P51906 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Slc1a1P51906 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Slc1a1P51906 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Slc1a1P51906 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc1a1P51906 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc1a1P51906 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Slc1a1P51906 Mir6236-201ENSMUST00000184437 123 ntBASIC20.92■□□□□ 0.94
Slc1a1P51906 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc1a1P51906 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc1a1P51906 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.92■□□□□ 0.94
Slc1a1P51906 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc1a1P51906 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Slc1a1P51906 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc1a1P51906 Gm15546-201ENSMUST00000122095 826 ntBASIC20.91■□□□□ 0.94
Slc1a1P51906 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Slc1a1P51906 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc1a1P51906 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Slc1a1P51906 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Slc1a1P51906 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc1a1P51906 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc1a1P51906 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Slc1a1P51906 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Slc1a1P51906 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc1a1P51906 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.9■□□□□ 0.94
Slc1a1P51906 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.9■□□□□ 0.94
Slc1a1P51906 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.9■□□□□ 0.94
Slc1a1P51906 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Slc1a1P51906 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.89■□□□□ 0.94
Slc1a1P51906 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc1a1P51906 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Slc1a1P51906 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc1a1P51906 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Slc1a1P51906 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc1a1P51906 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc1a1P51906 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
Slc1a1P51906 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc1a1P51906 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.88■□□□□ 0.93
Slc1a1P51906 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slc1a1P51906 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc1a1P51906 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc1a1P51906 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Slc1a1P51906 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc1a1P51906 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Slc1a1P51906 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc1a1P51906 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc1a1P51906 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slc1a1P51906 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc1a1P51906 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.93
Slc1a1P51906 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc1a1P51906 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Slc1a1P51906 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Slc1a1P51906 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.86■□□□□ 0.93
Slc1a1P51906 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.86■□□□□ 0.93
Slc1a1P51906 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Slc1a1P51906 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc1a1P51906 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc1a1P51906 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.86■□□□□ 0.93
Slc1a1P51906 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc1a1P51906 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc1a1P51906 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc1a1P51906 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Slc1a1P51906 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc1a1P51906 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc1a1P51906 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc1a1P51906 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a1P51906 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.84■□□□□ 0.93
Slc1a1P51906 Etf1-202ENSMUST00000180351 108 ntBASIC20.84■□□□□ 0.93
Slc1a1P51906 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Slc1a1P51906 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.84■□□□□ 0.93
Slc1a1P51906 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a1P51906 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a1P51906 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a1P51906 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Slc1a1P51906 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Slc1a1P51906 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Slc1a1P51906 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.83■□□□□ 0.93
Slc1a1P51906 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Slc1a1P51906 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc1a1P51906 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Slc1a1P51906 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Slc1a1P51906 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.83■□□□□ 0.93
Slc1a1P51906 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc1a1P51906 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slc1a1P51906 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slc1a1P51906 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slc1a1P51906 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a1P51906 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
Slc1a1P51906 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a1P51906 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a1P51906 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a1P51906 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a1P51906 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a1P51906 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms