Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Rfx2P48379 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx2P48379 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Rfx2P48379 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.84■□□□□ 0.93
Rfx2P48379 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Rfx2P48379 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.84■□□□□ 0.93
Rfx2P48379 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx2P48379 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx2P48379 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx2P48379 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx2P48379 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfx2P48379 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Rfx2P48379 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Rfx2P48379 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.83■□□□□ 0.93
Rfx2P48379 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rfx2P48379 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.83■□□□□ 0.93
Rfx2P48379 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rfx2P48379 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rfx2P48379 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rfx2P48379 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.83■□□□□ 0.92
Rfx2P48379 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rfx2P48379 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.83■□□□□ 0.92
Rfx2P48379 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rfx2P48379 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rfx2P48379 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rfx2P48379 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx2P48379 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx2P48379 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.82■□□□□ 0.92
Rfx2P48379 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx2P48379 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx2P48379 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx2P48379 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx2P48379 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx2P48379 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx2P48379 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.82■□□□□ 0.92
Rfx2P48379 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx2P48379 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
Rfx2P48379 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx2P48379 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Rfx2P48379 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx2P48379 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx2P48379 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.81■□□□□ 0.92
Rfx2P48379 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.81■□□□□ 0.92
Rfx2P48379 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx2P48379 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx2P48379 Gm8495-201ENSMUST00000188740 694 ntBASIC20.81■□□□□ 0.92
Rfx2P48379 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx2P48379 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx2P48379 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx2P48379 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
Rfx2P48379 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx2P48379 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx2P48379 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx2P48379 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Rfx2P48379 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx2P48379 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Rfx2P48379 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Rfx2P48379 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.8■□□□□ 0.92
Rfx2P48379 Gm18284-201ENSMUST00000172604 624 ntBASIC20.8■□□□□ 0.92
Rfx2P48379 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx2P48379 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.8■□□□□ 0.92
Rfx2P48379 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx2P48379 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx2P48379 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx2P48379 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Rfx2P48379 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx2P48379 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx2P48379 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx2P48379 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
Rfx2P48379 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Rfx2P48379 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Rfx2P48379 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx2P48379 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx2P48379 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Rfx2P48379 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx2P48379 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx2P48379 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx2P48379 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.78■□□□□ 0.92
Rfx2P48379 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx2P48379 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx2P48379 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx2P48379 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Rfx2P48379 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.77■□□□□ 0.92
Rfx2P48379 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.77■□□□□ 0.92
Rfx2P48379 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rfx2P48379 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rfx2P48379 Gm43173-201ENSMUST00000202246 593 ntBASIC20.77■□□□□ 0.92
Rfx2P48379 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Rfx2P48379 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rfx2P48379 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rfx2P48379 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx2P48379 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Rfx2P48379 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx2P48379 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Rfx2P48379 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.76■□□□□ 0.91
Rfx2P48379 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx2P48379 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx2P48379 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx2P48379 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx2P48379 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms