Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gli1P47806 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gli1P47806 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gli1P47806 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
Gli1P47806 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gli1P47806 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Gli1P47806 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gli1P47806 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gli1P47806 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gli1P47806 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gli1P47806 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.35■□□□□ 0.69
Gli1P47806 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gli1P47806 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gli1P47806 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gli1P47806 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Gli1P47806 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gli1P47806 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.35■□□□□ 0.69
Gli1P47806 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gli1P47806 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gli1P47806 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.35■□□□□ 0.69
Gli1P47806 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Gli1P47806 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gli1P47806 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Gli1P47806 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gli1P47806 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gli1P47806 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gli1P47806 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gli1P47806 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gli1P47806 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gli1P47806 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.34■□□□□ 0.69
Gli1P47806 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gli1P47806 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gli1P47806 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Gli1P47806 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.33■□□□□ 0.69
Gli1P47806 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gli1P47806 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gli1P47806 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Gli1P47806 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gli1P47806 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.33■□□□□ 0.68
Gli1P47806 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.33■□□□□ 0.68
Gli1P47806 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.33■□□□□ 0.68
Gli1P47806 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gli1P47806 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.33■□□□□ 0.68
Gli1P47806 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gli1P47806 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gli1P47806 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.32■□□□□ 0.68
Gli1P47806 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gli1P47806 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gli1P47806 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Gli1P47806 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gli1P47806 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gli1P47806 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gli1P47806 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Gli1P47806 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gli1P47806 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gli1P47806 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Gli1P47806 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gli1P47806 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.31■□□□□ 0.68
Gli1P47806 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.31■□□□□ 0.68
Gli1P47806 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.31■□□□□ 0.68
Gli1P47806 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gli1P47806 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gli1P47806 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Gli1P47806 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gli1P47806 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gli1P47806 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Gli1P47806 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gli1P47806 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gli1P47806 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gli1P47806 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gli1P47806 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gli1P47806 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gli1P47806 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gli1P47806 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.29■□□□□ 0.68
Gli1P47806 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gli1P47806 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.29■□□□□ 0.68
Gli1P47806 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gli1P47806 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gli1P47806 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gli1P47806 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gli1P47806 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gli1P47806 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gli1P47806 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gli1P47806 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.28■□□□□ 0.68
Gli1P47806 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gli1P47806 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Gli1P47806 Gm12922-201ENSMUST00000120626 809 ntBASIC19.28■□□□□ 0.68
Gli1P47806 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.28■□□□□ 0.68
Gli1P47806 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gli1P47806 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.28■□□□□ 0.68
Gli1P47806 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gli1P47806 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Gli1P47806 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gli1P47806 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gli1P47806 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gli1P47806 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gli1P47806 Gm10399-202ENSMUST00000202768 748 ntBASIC19.27■□□□□ 0.68
Gli1P47806 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.27■□□□□ 0.68
Gli1P47806 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gli1P47806 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms