Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdx2P43241 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdx2P43241 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cdx2P43241 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdx2P43241 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cdx2P43241 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cdx2P43241 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cdx2P43241 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdx2P43241 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cdx2P43241 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Cdx2P43241 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.06■□□□□ 0.64
Cdx2P43241 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdx2P43241 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdx2P43241 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdx2P43241 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdx2P43241 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdx2P43241 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdx2P43241 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Cdx2P43241 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdx2P43241 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdx2P43241 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdx2P43241 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cdx2P43241 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdx2P43241 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Cdx2P43241 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdx2P43241 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cdx2P43241 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cdx2P43241 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdx2P43241 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cdx2P43241 Gm7514-201ENSMUST00000209475 934 ntBASIC19.03■□□□□ 0.64
Cdx2P43241 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdx2P43241 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdx2P43241 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdx2P43241 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdx2P43241 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cdx2P43241 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Cdx2P43241 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.02■□□□□ 0.64
Cdx2P43241 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cdx2P43241 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cdx2P43241 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.02■□□□□ 0.64
Cdx2P43241 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdx2P43241 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdx2P43241 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Cdx2P43241 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdx2P43241 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdx2P43241 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cdx2P43241 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cdx2P43241 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.01■□□□□ 0.63
Cdx2P43241 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cdx2P43241 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.01■□□□□ 0.63
Cdx2P43241 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdx2P43241 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdx2P43241 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.01■□□□□ 0.63
Cdx2P43241 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdx2P43241 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdx2P43241 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdx2P43241 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Cdx2P43241 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdx2P43241 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cdx2P43241 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Cdx2P43241 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19■□□□□ 0.63
Cdx2P43241 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19■□□□□ 0.63
Cdx2P43241 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdx2P43241 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdx2P43241 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdx2P43241 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdx2P43241 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdx2P43241 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdx2P43241 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdx2P43241 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdx2P43241 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.99■□□□□ 0.63
Cdx2P43241 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cdx2P43241 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cdx2P43241 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Cdx2P43241 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdx2P43241 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdx2P43241 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdx2P43241 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdx2P43241 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdx2P43241 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdx2P43241 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdx2P43241 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdx2P43241 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cdx2P43241 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.97■□□□□ 0.63
Cdx2P43241 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cdx2P43241 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdx2P43241 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdx2P43241 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdx2P43241 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdx2P43241 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdx2P43241 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdx2P43241 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.96■□□□□ 0.63
Cdx2P43241 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdx2P43241 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
Cdx2P43241 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdx2P43241 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdx2P43241 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdx2P43241 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.96■□□□□ 0.63
Cdx2P43241 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.96■□□□□ 0.63
Cdx2P43241 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms