Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfsf9P41274 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfsf9P41274 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.07■□□□□ 0.64
Tnfsf9P41274 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfsf9P41274 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.07■□□□□ 0.64
Tnfsf9P41274 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfsf9P41274 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Tnfsf9P41274 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfsf9P41274 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfsf9P41274 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.07■□□□□ 0.64
Tnfsf9P41274 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfsf9P41274 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfsf9P41274 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfsf9P41274 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfsf9P41274 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tnfsf9P41274 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tnfsf9P41274 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.06■□□□□ 0.64
Tnfsf9P41274 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.06■□□□□ 0.64
Tnfsf9P41274 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tnfsf9P41274 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Tnfsf9P41274 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tnfsf9P41274 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tnfsf9P41274 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tnfsf9P41274 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfsf9P41274 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Tnfsf9P41274 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfsf9P41274 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfsf9P41274 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfsf9P41274 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfsf9P41274 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.05■□□□□ 0.64
Tnfsf9P41274 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfsf9P41274 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfsf9P41274 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfsf9P41274 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.05■□□□□ 0.64
Tnfsf9P41274 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfsf9P41274 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfsf9P41274 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.04■□□□□ 0.64
Tnfsf9P41274 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfsf9P41274 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfsf9P41274 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfsf9P41274 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfsf9P41274 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfsf9P41274 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
Tnfsf9P41274 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Tnfsf9P41274 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfsf9P41274 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfsf9P41274 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfsf9P41274 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfsf9P41274 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfsf9P41274 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfsf9P41274 Gm18284-201ENSMUST00000172604 624 ntBASIC19.03■□□□□ 0.64
Tnfsf9P41274 Gm43060-201ENSMUST00000200621 289 ntBASIC19.03■□□□□ 0.64
Tnfsf9P41274 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.03■□□□□ 0.64
Tnfsf9P41274 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfsf9P41274 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Tnfsf9P41274 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Tnfsf9P41274 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfsf9P41274 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfsf9P41274 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfsf9P41274 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Tnfsf9P41274 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfsf9P41274 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfsf9P41274 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfsf9P41274 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfsf9P41274 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Tnfsf9P41274 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfsf9P41274 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.02■□□□□ 0.64
Tnfsf9P41274 Smad6-203ENSMUST00000179458 273 ntBASIC19.02■□□□□ 0.64
Tnfsf9P41274 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.02■□□□□ 0.64
Tnfsf9P41274 Gm40848-201ENSMUST00000221998 324 ntBASIC19.02■□□□□ 0.64
Tnfsf9P41274 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfsf9P41274 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Tnfsf9P41274 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tnfsf9P41274 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tnfsf9P41274 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Tnfsf9P41274 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfsf9P41274 Gm8495-201ENSMUST00000188740 694 ntBASIC19.01■□□□□ 0.63
Tnfsf9P41274 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.01■□□□□ 0.63
Tnfsf9P41274 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfsf9P41274 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Tnfsf9P41274 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.01■□□□□ 0.63
Tnfsf9P41274 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfsf9P41274 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfsf9P41274 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Tnfsf9P41274 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tnfsf9P41274 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfsf9P41274 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfsf9P41274 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfsf9P41274 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tnfsf9P41274 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfsf9P41274 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tnfsf9P41274 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfsf9P41274 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfsf9P41274 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19■□□□□ 0.63
Tnfsf9P41274 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfsf9P41274 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfsf9P41274 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfsf9P41274 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfsf9P41274 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfsf9P41274 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms