Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.44■□□□□ 0.22
Abca1P41233 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Abca1P41233 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Abca1P41233 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Abca1P41233 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abca1P41233 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abca1P41233 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abca1P41233 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Abca1P41233 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abca1P41233 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.43■□□□□ 0.22
Abca1P41233 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Abca1P41233 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Abca1P41233 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abca1P41233 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Abca1P41233 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Abca1P41233 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abca1P41233 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abca1P41233 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca1P41233 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca1P41233 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca1P41233 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca1P41233 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Abca1P41233 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca1P41233 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.42■□□□□ 0.22
Abca1P41233 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca1P41233 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca1P41233 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.42■□□□□ 0.22
Abca1P41233 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.42■□□□□ 0.22
Abca1P41233 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Abca1P41233 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Abca1P41233 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abca1P41233 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abca1P41233 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abca1P41233 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abca1P41233 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.41■□□□□ 0.22
Abca1P41233 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abca1P41233 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abca1P41233 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abca1P41233 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
Abca1P41233 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abca1P41233 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.41■□□□□ 0.22
Abca1P41233 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Abca1P41233 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abca1P41233 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.4■□□□□ 0.22
Abca1P41233 Gm12933-201ENSMUST00000120203 872 ntBASIC16.4■□□□□ 0.22
Abca1P41233 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Abca1P41233 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.4■□□□□ 0.22
Abca1P41233 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca1P41233 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca1P41233 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca1P41233 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.4■□□□□ 0.22
Abca1P41233 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca1P41233 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca1P41233 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca1P41233 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.39■□□□□ 0.21
Abca1P41233 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abca1P41233 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abca1P41233 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abca1P41233 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Abca1P41233 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abca1P41233 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abca1P41233 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abca1P41233 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Abca1P41233 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Abca1P41233 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abca1P41233 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.39■□□□□ 0.21
Abca1P41233 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abca1P41233 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Abca1P41233 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Abca1P41233 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abca1P41233 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Abca1P41233 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abca1P41233 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abca1P41233 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Abca1P41233 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Abca1P41233 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.38■□□□□ 0.21
Abca1P41233 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Abca1P41233 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abca1P41233 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Abca1P41233 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Abca1P41233 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abca1P41233 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abca1P41233 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abca1P41233 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Abca1P41233 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abca1P41233 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abca1P41233 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.37■□□□□ 0.21
Abca1P41233 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Abca1P41233 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.36■□□□□ 0.21
Abca1P41233 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.36■□□□□ 0.21
Abca1P41233 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.36■□□□□ 0.21
Abca1P41233 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Abca1P41233 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Abca1P41233 Gm42778-201ENSMUST00000199644 553 ntBASIC16.36■□□□□ 0.21
Abca1P41233 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.36■□□□□ 0.21
Abca1P41233 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Abca1P41233 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Abca1P41233 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Abca1P41233 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Abca1P41233 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms