Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cd9P40240 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cd9P40240 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cd9P40240 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.73■□□□□ 0.75
Cd9P40240 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Cd9P40240 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cd9P40240 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cd9P40240 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cd9P40240 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cd9P40240 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.73■□□□□ 0.75
Cd9P40240 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cd9P40240 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cd9P40240 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd9P40240 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Cd9P40240 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cd9P40240 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd9P40240 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cd9P40240 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cd9P40240 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd9P40240 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.71■□□□□ 0.75
Cd9P40240 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cd9P40240 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd9P40240 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd9P40240 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd9P40240 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.7■□□□□ 0.74
Cd9P40240 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd9P40240 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd9P40240 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd9P40240 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.7■□□□□ 0.74
Cd9P40240 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd9P40240 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd9P40240 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cd9P40240 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.7■□□□□ 0.74
Cd9P40240 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd9P40240 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd9P40240 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.69■□□□□ 0.74
Cd9P40240 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd9P40240 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd9P40240 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd9P40240 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd9P40240 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.69■□□□□ 0.74
Cd9P40240 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd9P40240 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd9P40240 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd9P40240 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cd9P40240 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cd9P40240 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cd9P40240 Gm9847-201ENSMUST00000052528 599 ntBASIC19.68■□□□□ 0.74
Cd9P40240 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cd9P40240 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.68■□□□□ 0.74
Cd9P40240 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cd9P40240 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cd9P40240 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Cd9P40240 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cd9P40240 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cd9P40240 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cd9P40240 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cd9P40240 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.67■□□□□ 0.74
Cd9P40240 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Cd9P40240 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cd9P40240 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cd9P40240 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.67■□□□□ 0.74
Cd9P40240 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cd9P40240 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cd9P40240 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cd9P40240 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cd9P40240 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cd9P40240 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.67■□□□□ 0.74
Cd9P40240 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cd9P40240 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cd9P40240 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cd9P40240 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.66■□□□□ 0.74
Cd9P40240 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Cd9P40240 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Cd9P40240 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.66■□□□□ 0.74
Cd9P40240 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cd9P40240 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cd9P40240 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cd9P40240 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.65■□□□□ 0.74
Cd9P40240 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.65■□□□□ 0.74
Cd9P40240 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cd9P40240 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cd9P40240 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cd9P40240 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cd9P40240 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cd9P40240 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.65■□□□□ 0.74
Cd9P40240 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.65■□□□□ 0.74
Cd9P40240 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cd9P40240 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cd9P40240 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cd9P40240 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Cd9P40240 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cd9P40240 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cd9P40240 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cd9P40240 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cd9P40240 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cd9P40240 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cd9P40240 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cd9P40240 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Cd9P40240 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms