Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.75■□□□□ 0.91
Cxcl12P40224 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Cxcl12P40224 Gm12918-201ENSMUST00000120234 636 ntBASIC20.75■□□□□ 0.91
Cxcl12P40224 Gm15710-201ENSMUST00000121821 636 ntBASIC20.75■□□□□ 0.91
Cxcl12P40224 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.75■□□□□ 0.91
Cxcl12P40224 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.75■□□□□ 0.91
Cxcl12P40224 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.75■□□□□ 0.91
Cxcl12P40224 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.75■□□□□ 0.91
Cxcl12P40224 Gm5075-201ENSMUST00000196916 622 ntBASIC20.75■□□□□ 0.91
Cxcl12P40224 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.75■□□□□ 0.91
Cxcl12P40224 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.75■□□□□ 0.91
Cxcl12P40224 Gm10812-201ENSMUST00000099864 546 ntBASIC20.75■□□□□ 0.91
Cxcl12P40224 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Cxcl12P40224 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cxcl12P40224 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cxcl12P40224 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Cxcl12P40224 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Cxcl12P40224 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.74■□□□□ 0.91
Cxcl12P40224 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.74■□□□□ 0.91
Cxcl12P40224 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.74■□□□□ 0.91
Cxcl12P40224 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cxcl12P40224 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cxcl12P40224 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cxcl12P40224 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cxcl12P40224 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cxcl12P40224 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cxcl12P40224 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Cxcl12P40224 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cxcl12P40224 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cxcl12P40224 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.73■□□□□ 0.91
Cxcl12P40224 Gm6365-201ENSMUST00000054711 744 ntBASIC20.73■□□□□ 0.91
Cxcl12P40224 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cxcl12P40224 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.73■□□□□ 0.91
Cxcl12P40224 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.73■□□□□ 0.91
Cxcl12P40224 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cxcl12P40224 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cxcl12P40224 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.72■□□□□ 0.91
Cxcl12P40224 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cxcl12P40224 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cxcl12P40224 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cxcl12P40224 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.72■□□□□ 0.91
Cxcl12P40224 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cxcl12P40224 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cxcl12P40224 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cxcl12P40224 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cxcl12P40224 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Cxcl12P40224 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cxcl12P40224 Gm13148-201ENSMUST00000118892 745 ntBASIC20.71■□□□□ 0.91
Cxcl12P40224 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cxcl12P40224 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.71■□□□□ 0.91
Cxcl12P40224 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.71■□□□□ 0.91
Cxcl12P40224 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cxcl12P40224 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cxcl12P40224 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cxcl12P40224 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cxcl12P40224 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cxcl12P40224 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Cxcl12P40224 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.7■□□□□ 0.9
Cxcl12P40224 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cxcl12P40224 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cxcl12P40224 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.7■□□□□ 0.9
Cxcl12P40224 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cxcl12P40224 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.7■□□□□ 0.9
Cxcl12P40224 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.7■□□□□ 0.9
Cxcl12P40224 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cxcl12P40224 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Cxcl12P40224 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.7■□□□□ 0.9
Cxcl12P40224 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cxcl12P40224 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cxcl12P40224 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cxcl12P40224 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cxcl12P40224 Gm20049-201ENSMUST00000219950 730 ntBASIC20.69■□□□□ 0.9
Cxcl12P40224 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cxcl12P40224 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cxcl12P40224 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.69■□□□□ 0.9
Cxcl12P40224 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cxcl12P40224 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cxcl12P40224 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cxcl12P40224 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cxcl12P40224 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cxcl12P40224 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.68■□□□□ 0.9
Cxcl12P40224 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cxcl12P40224 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cxcl12P40224 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cxcl12P40224 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.67■□□□□ 0.9
Cxcl12P40224 Gm7977-201ENSMUST00000193787 748 ntBASIC20.67■□□□□ 0.9
Cxcl12P40224 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cxcl12P40224 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cxcl12P40224 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cxcl12P40224 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cxcl12P40224 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cxcl12P40224 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cxcl12P40224 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cxcl12P40224 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cxcl12P40224 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cxcl12P40224 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cxcl12P40224 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cxcl12P40224 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.66■□□□□ 0.9
Cxcl12P40224 Mir6982-201ENSMUST00000184354 68 ntBASIC20.66■□□□□ 0.9
Cxcl12P40224 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms