Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfc1P35601 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfc1P35601 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rfc1P35601 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rfc1P35601 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rfc1P35601 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rfc1P35601 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Rfc1P35601 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.89■□□□□ 0.93
Rfc1P35601 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rfc1P35601 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rfc1P35601 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rfc1P35601 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rfc1P35601 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rfc1P35601 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Rfc1P35601 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.88■□□□□ 0.93
Rfc1P35601 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfc1P35601 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.88■□□□□ 0.93
Rfc1P35601 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfc1P35601 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfc1P35601 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Rfc1P35601 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfc1P35601 Cap2-205ENSMUST00000225824 1634 ntBASIC20.88■□□□□ 0.93
Rfc1P35601 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfc1P35601 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rfc1P35601 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfc1P35601 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfc1P35601 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Rfc1P35601 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rfc1P35601 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.87■□□□□ 0.93
Rfc1P35601 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rfc1P35601 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rfc1P35601 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rfc1P35601 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfc1P35601 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfc1P35601 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfc1P35601 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rfc1P35601 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfc1P35601 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.86■□□□□ 0.93
Rfc1P35601 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfc1P35601 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfc1P35601 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rfc1P35601 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.86■□□□□ 0.93
Rfc1P35601 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfc1P35601 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rfc1P35601 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Rfc1P35601 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfc1P35601 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfc1P35601 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfc1P35601 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfc1P35601 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Rfc1P35601 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfc1P35601 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Rfc1P35601 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfc1P35601 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfc1P35601 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfc1P35601 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rfc1P35601 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Rfc1P35601 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfc1P35601 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfc1P35601 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.85■□□□□ 0.93
Rfc1P35601 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfc1P35601 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Rfc1P35601 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.84■□□□□ 0.93
Rfc1P35601 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfc1P35601 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.84■□□□□ 0.93
Rfc1P35601 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rfc1P35601 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.84■□□□□ 0.93
Rfc1P35601 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfc1P35601 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfc1P35601 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rfc1P35601 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfc1P35601 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfc1P35601 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfc1P35601 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Rfc1P35601 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfc1P35601 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Rfc1P35601 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfc1P35601 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.83■□□□□ 0.93
Rfc1P35601 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rfc1P35601 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.83■□□□□ 0.93
Rfc1P35601 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rfc1P35601 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Rfc1P35601 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rfc1P35601 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rfc1P35601 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfc1P35601 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfc1P35601 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rfc1P35601 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rfc1P35601 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfc1P35601 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfc1P35601 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Rfc1P35601 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rfc1P35601 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfc1P35601 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rfc1P35601 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfc1P35601 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfc1P35601 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.81■□□□□ 0.92
Rfc1P35601 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfc1P35601 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rfc1P35601 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms