Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a13P31649 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a13P31649 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.29■□□□□ 0.84
Slc6a13P31649 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.29■□□□□ 0.84
Slc6a13P31649 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a13P31649 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Slc6a13P31649 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a13P31649 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.28■□□□□ 0.84
Slc6a13P31649 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a13P31649 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a13P31649 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Slc6a13P31649 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Slc6a13P31649 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Slc6a13P31649 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a13P31649 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a13P31649 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a13P31649 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a13P31649 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a13P31649 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a13P31649 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a13P31649 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a13P31649 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a13P31649 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Slc6a13P31649 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.27■□□□□ 0.84
Slc6a13P31649 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a13P31649 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a13P31649 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a13P31649 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Slc6a13P31649 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Slc6a13P31649 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a13P31649 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Slc6a13P31649 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Slc6a13P31649 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a13P31649 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a13P31649 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a13P31649 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.26■□□□□ 0.83
Slc6a13P31649 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.26■□□□□ 0.83
Slc6a13P31649 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a13P31649 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Slc6a13P31649 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a13P31649 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a13P31649 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a13P31649 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Slc6a13P31649 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Slc6a13P31649 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a13P31649 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.25■□□□□ 0.83
Slc6a13P31649 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Slc6a13P31649 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Slc6a13P31649 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Slc6a13P31649 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a13P31649 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.24■□□□□ 0.83
Slc6a13P31649 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a13P31649 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.24■□□□□ 0.83
Slc6a13P31649 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
Slc6a13P31649 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.24■□□□□ 0.83
Slc6a13P31649 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a13P31649 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a13P31649 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a13P31649 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a13P31649 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.24■□□□□ 0.83
Slc6a13P31649 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a13P31649 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a13P31649 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a13P31649 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a13P31649 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.23■□□□□ 0.83
Slc6a13P31649 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Slc6a13P31649 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.23■□□□□ 0.83
Slc6a13P31649 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a13P31649 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a13P31649 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.23■□□□□ 0.83
Slc6a13P31649 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a13P31649 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a13P31649 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Slc6a13P31649 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Slc6a13P31649 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.22■□□□□ 0.83
Slc6a13P31649 Gm43137-201ENSMUST00000198052 594 ntBASIC20.22■□□□□ 0.83
Slc6a13P31649 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Slc6a13P31649 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a13P31649 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a13P31649 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a13P31649 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a13P31649 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a13P31649 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Slc6a13P31649 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a13P31649 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a13P31649 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a13P31649 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a13P31649 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a13P31649 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a13P31649 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a13P31649 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a13P31649 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.2■□□□□ 0.82
Slc6a13P31649 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.2■□□□□ 0.82
Slc6a13P31649 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a13P31649 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a13P31649 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Slc6a13P31649 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Slc6a13P31649 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a13P31649 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a13P31649 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms