Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Nedd8P29595 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.41■□□□□ 0.54
Nedd8P29595 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.41■□□□□ 0.54
Nedd8P29595 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
Nedd8P29595 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nedd8P29595 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nedd8P29595 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nedd8P29595 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Nedd8P29595 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nedd8P29595 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nedd8P29595 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nedd8P29595 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.4■□□□□ 0.54
Nedd8P29595 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Nedd8P29595 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Nedd8P29595 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.4■□□□□ 0.54
Nedd8P29595 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Nedd8P29595 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Nedd8P29595 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Nedd8P29595 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Nedd8P29595 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Nedd8P29595 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nedd8P29595 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Nedd8P29595 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nedd8P29595 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
Nedd8P29595 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nedd8P29595 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nedd8P29595 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nedd8P29595 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nedd8P29595 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Nedd8P29595 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nedd8P29595 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Nedd8P29595 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nedd8P29595 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Nedd8P29595 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Nedd8P29595 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nedd8P29595 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.38■□□□□ 0.53
Nedd8P29595 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nedd8P29595 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nedd8P29595 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nedd8P29595 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nedd8P29595 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nedd8P29595 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nedd8P29595 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nedd8P29595 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nedd8P29595 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.37■□□□□ 0.53
Nedd8P29595 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nedd8P29595 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nedd8P29595 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.37■□□□□ 0.53
Nedd8P29595 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Nedd8P29595 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nedd8P29595 Rarb-207ENSMUST00000225921 2756 ntBASIC18.36■□□□□ 0.53
Nedd8P29595 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Nedd8P29595 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nedd8P29595 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.36■□□□□ 0.53
Nedd8P29595 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nedd8P29595 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Nedd8P29595 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nedd8P29595 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nedd8P29595 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.35■□□□□ 0.53
Nedd8P29595 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nedd8P29595 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nedd8P29595 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nedd8P29595 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nedd8P29595 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nedd8P29595 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nedd8P29595 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.34■□□□□ 0.53
Nedd8P29595 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nedd8P29595 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nedd8P29595 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Nedd8P29595 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Nedd8P29595 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nedd8P29595 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nedd8P29595 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Nedd8P29595 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.34■□□□□ 0.53
Nedd8P29595 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nedd8P29595 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.34■□□□□ 0.53
Nedd8P29595 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nedd8P29595 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nedd8P29595 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Nedd8P29595 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.33■□□□□ 0.53
Nedd8P29595 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Nedd8P29595 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nedd8P29595 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nedd8P29595 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Nedd8P29595 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nedd8P29595 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Nedd8P29595 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Nedd8P29595 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nedd8P29595 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nedd8P29595 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nedd8P29595 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Nedd8P29595 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Nedd8P29595 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nedd8P29595 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.32■□□□□ 0.52
Nedd8P29595 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nedd8P29595 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nedd8P29595 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nedd8P29595 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nedd8P29595 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Nedd8P29595 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms