Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BdnfP21237 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
BdnfP21237 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BdnfP21237 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
BdnfP21237 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BdnfP21237 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BdnfP21237 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BdnfP21237 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.03■□□□□ 0.64
BdnfP21237 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.03■□□□□ 0.64
BdnfP21237 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.03■□□□□ 0.64
BdnfP21237 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
BdnfP21237 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
BdnfP21237 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.03■□□□□ 0.64
BdnfP21237 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
BdnfP21237 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BdnfP21237 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BdnfP21237 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.02■□□□□ 0.64
BdnfP21237 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BdnfP21237 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.02■□□□□ 0.63
BdnfP21237 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
BdnfP21237 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
BdnfP21237 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
BdnfP21237 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
BdnfP21237 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
BdnfP21237 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
BdnfP21237 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
BdnfP21237 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
BdnfP21237 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
BdnfP21237 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BdnfP21237 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BdnfP21237 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.01■□□□□ 0.63
BdnfP21237 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BdnfP21237 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BdnfP21237 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BdnfP21237 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.01■□□□□ 0.63
BdnfP21237 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BdnfP21237 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BdnfP21237 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BdnfP21237 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19■□□□□ 0.63
BdnfP21237 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
BdnfP21237 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
BdnfP21237 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
BdnfP21237 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.99■□□□□ 0.63
BdnfP21237 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BdnfP21237 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BdnfP21237 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
BdnfP21237 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BdnfP21237 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.99■□□□□ 0.63
BdnfP21237 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BdnfP21237 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BdnfP21237 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
BdnfP21237 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
BdnfP21237 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BdnfP21237 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
BdnfP21237 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BdnfP21237 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
BdnfP21237 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.98■□□□□ 0.63
BdnfP21237 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BdnfP21237 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BdnfP21237 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BdnfP21237 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.97■□□□□ 0.63
BdnfP21237 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BdnfP21237 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
BdnfP21237 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BdnfP21237 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BdnfP21237 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.97■□□□□ 0.63
BdnfP21237 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BdnfP21237 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
BdnfP21237 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
BdnfP21237 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BdnfP21237 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BdnfP21237 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BdnfP21237 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
BdnfP21237 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BdnfP21237 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BdnfP21237 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BdnfP21237 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BdnfP21237 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BdnfP21237 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BdnfP21237 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BdnfP21237 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BdnfP21237 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BdnfP21237 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BdnfP21237 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BdnfP21237 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.95■□□□□ 0.62
BdnfP21237 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
BdnfP21237 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BdnfP21237 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
BdnfP21237 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BdnfP21237 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BdnfP21237 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.94■□□□□ 0.62
BdnfP21237 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.94■□□□□ 0.62
BdnfP21237 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.94■□□□□ 0.62
BdnfP21237 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BdnfP21237 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.94■□□□□ 0.62
BdnfP21237 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.94■□□□□ 0.62
BdnfP21237 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BdnfP21237 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BdnfP21237 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.93■□□□□ 0.62
BdnfP21237 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms