Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Hoxb9P20615 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxb9P20615 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxb9P20615 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxb9P20615 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxb9P20615 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxb9P20615 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxb9P20615 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Hoxb9P20615 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.17■□□□□ 0.66
Hoxb9P20615 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxb9P20615 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxb9P20615 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxb9P20615 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxb9P20615 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.17■□□□□ 0.66
Hoxb9P20615 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.17■□□□□ 0.66
Hoxb9P20615 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxb9P20615 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxb9P20615 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxb9P20615 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxb9P20615 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxb9P20615 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Hoxb9P20615 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Hoxb9P20615 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxb9P20615 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxb9P20615 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxb9P20615 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxb9P20615 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Hoxb9P20615 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxb9P20615 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxb9P20615 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxb9P20615 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxb9P20615 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.15■□□□□ 0.66
Hoxb9P20615 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Hoxb9P20615 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Hoxb9P20615 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxb9P20615 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxb9P20615 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Hoxb9P20615 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.14■□□□□ 0.66
Hoxb9P20615 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Hoxb9P20615 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxb9P20615 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxb9P20615 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Hoxb9P20615 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxb9P20615 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.14■□□□□ 0.65
Hoxb9P20615 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxb9P20615 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxb9P20615 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxb9P20615 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxb9P20615 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxb9P20615 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.13■□□□□ 0.65
Hoxb9P20615 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxb9P20615 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.13■□□□□ 0.65
Hoxb9P20615 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.13■□□□□ 0.65
Hoxb9P20615 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.13■□□□□ 0.65
Hoxb9P20615 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.12■□□□□ 0.65
Hoxb9P20615 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxb9P20615 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Hoxb9P20615 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxb9P20615 Notumos-201ENSMUST00000151998 2659 ntBASIC19.12■□□□□ 0.65
Hoxb9P20615 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxb9P20615 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Hoxb9P20615 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.11■□□□□ 0.65
Hoxb9P20615 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxb9P20615 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxb9P20615 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.11■□□□□ 0.65
Hoxb9P20615 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxb9P20615 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxb9P20615 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Hoxb9P20615 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxb9P20615 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxb9P20615 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxb9P20615 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxb9P20615 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxb9P20615 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxb9P20615 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxb9P20615 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxb9P20615 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxb9P20615 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Hoxb9P20615 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Hoxb9P20615 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxb9P20615 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxb9P20615 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Hoxb9P20615 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Hoxb9P20615 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxb9P20615 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxb9P20615 Gm9847-201ENSMUST00000052528 599 ntBASIC19.09■□□□□ 0.65
Hoxb9P20615 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.09■□□□□ 0.65
Hoxb9P20615 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxb9P20615 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxb9P20615 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxb9P20615 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.08■□□□□ 0.65
Hoxb9P20615 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hoxb9P20615 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Hoxb9P20615 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Hoxb9P20615 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Hoxb9P20615 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hoxb9P20615 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.08■□□□□ 0.64
Hoxb9P20615 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Hoxb9P20615 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxb9P20615 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms